RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	ATF1	P18846	271 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	POLR2C	P19387	275 aa	Predicted RBP	7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	RAB3B	P20337	219 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	ENPP1	P22413	925 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	CERS1	P27544	350 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	NDUFS1	P28331	727 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	TALDO1	P37837	337 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	MNDA	P41218	407 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	SRP9	P49458	86 aa	Known RBP	7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	MECP2	P51608	486 aa	Known RBP	7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	PRKAG1	P54619	331 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	NRG3	P56975	720 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	STXBP1	P61764	594 aa	Known RBP	7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	TGM3	Q08188	693 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	DUSP8	Q13202	625 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	EXOSC2	Q13868	293 aa	Known RBP	7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	GGTLC2	Q14390	218 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	MAPK14	Q16539	360 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	ELFN2	Q5R3F8	820 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	OLFML2A	Q68BL7	652 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	PLBD1	Q6P4A8	553 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	FAM111B	Q6SJ93	734 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	ARL9	Q6T311	187 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	TMPRSS11F	Q6ZWK6	438 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	RAB11FIP2	Q7L804	512 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	SLC51B	Q86UW2	128 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	ADGRG3	Q86Y34	549 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	UXS1	Q8NBZ7	420 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	FAM98A	Q8NCA5	519 aa	Known RBP	7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR7G2	Q8NG99	324 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR9A2	Q8NGT5	310 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	PTP4A1	Q93096	173 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	NKD1	Q969G9	470 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	CLIP3	Q96DZ5	547 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	RHOV	Q96L33	236 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	HS6ST2	Q96MM7	605 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	MS4A4E	Q96PG1	132 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	RBP7	Q96R05	134 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	TIMM29	Q9BSF4	260 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	NDC1	Q9BTX1	674 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	TEX101	Q9BY14	249 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	ENKD1	Q9H0I2	346 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	LRRN3	Q9H3W5	708 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	EVA1A	Q9H8M9	152 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	MED20	Q9H944	212 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	FGF22	Q9HCT0	170 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	KRCC1	Q9NPI7	259 aa	Predicted RBP	7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	MED9	Q9NWA0	146 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	SIDT1	Q9NXL6	827 aa	Known RBP	7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	KLHL28	Q9NXS3	571 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	MAT2B	Q9NZL9	334 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	KCMF1	Q9P0J7	381 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	H2AFY2	Q9P0M6	372 aa	Predicted RBP	7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	SCP2D1	Q9UJQ7	156 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	SLC13A4	Q9UKG4	626 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	FBXL3	Q9UKT7	428 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	ACSL5	Q9ULC5	683 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	SLC7A7	Q9UM01	511 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	SPATA2	Q9UM82	520 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	BAIAP2	Q9UQB8	552 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	CAMK2A	Q9UQM7	478 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	SIGLEC7	Q9Y286	467 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	TMEM5	Q9Y2B1	443 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	FKBP7	Q9Y680	259 aa		7.15	□□□□□ -1.26
SPIDR-223	ENST00000524033	TRAV6	A0A075B6T7	132 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033		A0A1B0GUH1	482 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033		A0A1W2PQM1	296 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	DAPL1	A0PJW8	107 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	PRSS38	A1L453	326 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	OR2M5	A3KFT3	312 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	GLOD5	A6NK44	160 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	RHPN2P1	A8MT19	583 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033		B4DGG1	531 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	LRRN3	E7EW58	273 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	NUDT21	O43809	227 aa	Known RBP	7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	URB1	O60287	2271 aa	Known RBP	7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	FCMR	O60667	390 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	PRAF2	O60831	178 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	TMEM127	O75204	238 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	PTP4A3	O75365	173 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	ERAL1	O75616	437 aa	Known RBP	7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	TGM6	O95932	706 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	CEACAM5	P06731	702 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	SLC35G4	P0C7Q5	338 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	JMJD7	P0C870	316 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	C8orf89	P0DMQ9	161 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	SMIM10L1	P0DMW3	83 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	ZNF250	P15622	560 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	PAICS	P22234	425 aa	Known RBP	7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	MAP3K8	P41279	467 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	RAB28	P51157	221 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	RAB8A	P61006	207 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	RPS7	P62081	194 aa	Known RBP	7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	RPS11	P62280	158 aa	Known RBP eCLIP	7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	ACTC1	P68032	377 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	ACTA1	P68133	377 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	PITPNA	Q00169	270 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	PUDP	Q08623	228 aa		7.14	□□□□□ -1.27
SPIDR-223	ENST00000524033	ILF3	Q12906	894 aa	Known RBP eCLIP	7.14	□□□□□ -1.27	2e-6	■■■■□ 21.1
SPIDR-223	ENST00000524033	EIF3I	Q13347	325 aa	Known RBP	7.14	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms