RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ZNF16P17020 682 aaPredicted RBP12□□□□□ -0.49
PCDHGB1-201ENST00000523390 GPR50Q13585 617 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 AGERQ15109 404 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 FIP1L1Q6UN15 594 aaKnown RBP12□□□□□ -0.49
PCDHGB1-201ENST00000523390 POGLUT1Q8NBL1 392 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 TMEM106AQ96A25 262 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 SEMA4CQ9C0C4 833 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 RNF167Q9H6Y7 350 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 MOKQ9UQ07 419 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 ALPK2Q86TB3 2170 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 DDAH2O95865 285 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 CD46P15529 392 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 P2RX1P51575 399 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 GP2P55259 537 aaKnown RBP12□□□□□ -0.49
PCDHGB1-201ENST00000523390 KCNJ8Q15842 424 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 MEP1BQ16820 701 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 TMEM201Q5SNT2 666 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF425Q6IV72 752 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 C5orf46Q6UWT4 87 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 BTLAQ7Z6A9 289 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF611Q8N823 705 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 CCDC54Q8NEL0 328 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 GRPEL2Q8TAA5 225 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 CREB3L1Q96BA8 519 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 ETV5P41161 510 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 ETV1P50549 477 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF81P51508 661 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 ARHGDIBP52566 201 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 PCGF3Q3KNV8 242 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 NIPAL3Q6P499 406 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 KIRREL2Q6UWL6 708 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 NDUFAF7Q7L592 441 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 AAED1Q7RTV5 226 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 KCTD20Q7Z5Y7 419 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 ABI3BPQ7Z7G0 1075 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 SFTPA2Q8IWL1 248 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 CNEP1R1Q8N9A8 125 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 SYNPRQ8TBG9 265 aa12□□□□□ -0.49
PCDHGB1-201ENST00000523390 MEPEQ9NQ76 525 aaPredicted RBP12□□□□□ -0.49
PCDHGB1-201ENST00000523390 TDRD6O60522 2096 aaKnown RBP12□□□□□ -0.49
PCDHGB1-201ENST00000523390 GOLGB1Q14789 3259 aaKnown RBP12□□□□□ -0.49
PCDHGB1-201ENST00000523390 SOD1P00441 154 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 SBK2P0C263 348 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 RBMXP38159 391 aaKnown RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 SLC26A5P58743 744 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 PUDPQ08623 228 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 STK11Q15831 433 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 KIAA0907Q7Z7F0 614 aaPredicted RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 TMEM99Q8N816 258 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 BOLLQ8N9W6 283 aaKnown RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZSCAN4Q8NAM6 433 aaPredicted RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 ENKD1Q9H0I2 346 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 PCED1AQ9H1Q7 454 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 CDH20Q9HBT6 801 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF226Q9NYT6 803 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 TMEFF2Q9UIK5 374 aaPredicted RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 CKAP5Q14008 2032 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 IGHV1OR21-1A0A087WYE8 117 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 NUDT21O43809 227 aaKnown RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 HOXC4P09017 264 aaPredicted RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 BCKDHBP21953 392 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 LCN1P31025 176 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 EPHA4P54764 986 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 SLC22A6Q4U2R8 563 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 FCRL6Q6DN72 434 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 FCRLAQ7L513 359 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 CPEB2Q7Z5Q1 589 aaKnown RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 SPERTQ8NA61 448 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 ABHD4Q8TB40 342 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 BORCS8Q96FH0 119 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 OR14A2Q96R54 314 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 THAP7Q9BT49 309 aaPredicted RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 GPATCH2Q9NW75 528 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 MGAT4CQ9UBM8 478 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 LCTP09848 1927 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 FTCDNL1E5RQL4 147 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 MRPL33O75394 65 aaKnown RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 ANXA3P12429 323 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 HIST1H1CP16403 213 aaKnown RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 RAB3AP20336 220 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 ACTBP60709 375 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 ACTG1P63261 375 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 TMEM205Q6UW68 189 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 BBS1Q8NFJ9 593 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 GPR32P1Q8NGA4 272 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 GIMAP5Q96F15 307 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 PDCD1LG2Q9BQ51 273 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 CPNE5Q9HCH3 593 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF224Q9NZL3 707 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 CAMK2AQ9UQM7 478 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 A0A1W2PS29 197 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 ZNF850A8MQ14 1090 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 PRH1P02810 166 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 GPR3P46089 330 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 HCCSP53701 268 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 PCBP4P57723 403 aaKnown RBP11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 NXPH1P58417 271 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 SLC35A1P78382 337 aa11.99□□□□□ -0.49
PCDHGB1-201ENST00000523390 FAM57BQ71RH2 274 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms