RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 FGF4P08620 206 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 PSMB1P20618 241 aaKnown RBP3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 GALP22466 123 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 SSR1P43307 286 aaKnown RBP3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 TFPI2P48307 235 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 PRRX1P54821 245 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 FBXW4P57775 412 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 RAP1BP61224 184 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 RPS8P62241 208 aaKnown RBP3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 KCNJ2P63252 427 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 TLE4Q04727 773 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 TGM3Q08188 693 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 SCD5Q86SK9 330 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 BIVMQ86UB2 503 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 MS4A15Q8N5U1 240 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 TMEM252Q8N6L7 170 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 C14orf178Q8N769 122 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 PLPPR1Q8TBJ4 325 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 FRAT1Q92837 279 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 FGF11Q92914 225 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 NAP1L5Q96NT1 182 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 MS4A4EQ96PG1 132 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 P2RY13Q9BPV8 354 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 CNPY3Q9BT09 278 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 RIOK2Q9BVS4 552 aaKnown RBP3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 ANKRA2Q9H9E1 313 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 TMCO1Q9UM00 188 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 ZNF256Q9Y2P7 627 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 ADGRL1O94910 1474 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 KDM6BO15054 1643 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 NSG1A0A0A6YYJ2 146 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 KIR2DL5BA0A0G2JN68 375 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 KIR2DL5BA0A0G2JPC4 375 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 ERVV-1B6SEH8 477 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 CHST1O43916 411 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 PRDX3P30048 256 aaKnown RBP3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 OTX1P32242 354 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 OR3A4PP47883 348 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 SAMD4BQ5PRF9 694 aaKnown RBP3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 LRRC31Q6UY01 552 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 HSDL2Q6YN16 418 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 NIPA1Q7RTP0 329 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 ZNF546Q86UE3 836 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 SLC26A11Q86WA9 606 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 KIR2DL5AQ8N109 375 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 SPATA4Q8NEY3 305 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 OR4C5Q8NGB2 326 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 OR2AP1Q8NGE2 309 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 KIR2DL5BQ8NHK3 375 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 PYROXD1Q8WU10 500 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 ACOT11Q8WXI4 607 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 ZNF414Q96IQ9 312 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 TMEM246Q9BRR3 403 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 NICN1Q9BSH3 213 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 MFFQ9GZY8 342 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 RNF167Q9H6Y7 350 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 GLRX2Q9NS18 164 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 CD274Q9NZQ7 290 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 PSMC3IPQ9P2W1 217 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 VSIG4Q9Y279 399 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 TMED5Q9Y3A6 229 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 SCN2AQ99250 2005 aa3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 PRRC2AP48634 2157 aaKnown RBP3.24□□□□□ -1.89
HMGB1P1-201ENST00000522557 A0A1W2PNU3 283 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 FAM231BA6NCW3 169 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 C12orf77C9JDV5 145 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 OR2F2O95006 317 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 UBTFL1P0CB47 393 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 GSSP48637 474 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 CDH6P55285 790 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 RNF212Q495C1 297 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 CARD17Q5XLA6 110 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 TRIM40Q6P9F5 258 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 TMEM220Q6QAJ8 160 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 MFSD6LQ8IWD5 586 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 CCDC65Q8IXS2 484 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 VN1R2Q8NFZ6 395 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 LINC01006Q8NI28 216 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 ACMSDQ8TDX5 336 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 OR8B4Q96RC9 309 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 SH3GL1Q99961 368 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 EBF4Q9BQW3 602 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 RANBP3Q9H6Z4 567 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 EXO5Q9H790 373 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 QPCTLQ9NXS2 382 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 XCL2Q9UBD3 114 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 CDH10Q9Y6N8 788 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 MEGF6O75095 1541 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 KIAA0586Q9BVV6 1533 aa3.23□□□□□ -1.89
HMGB1P1-201ENST00000522557 ATRXP46100 2492 aa3.22□□□□□ -1.89
HMGB1P1-201ENST00000522557 TEX14Q8IWB6 1497 aa3.22□□□□□ -1.89
HMGB1P1-201ENST00000522557 TTC21BQ7Z4L5 1316 aa3.22□□□□□ -1.89
HMGB1P1-201ENST00000522557 CD109Q6YHK3 1445 aa3.22□□□□□ -1.89
HMGB1P1-201ENST00000522557 UACAQ9BZF9 1416 aa3.22□□□□□ -1.89
HMGB1P1-201ENST00000522557 TRBV11-1A0A0K0K1C0 115 aa3.22□□□□□ -1.89
HMGB1P1-201ENST00000522557 DLGAP1O14490 977 aa3.22□□□□□ -1.89
HMGB1P1-201ENST00000522557 TNFSF11O14788 317 aa3.22□□□□□ -1.89
HMGB1P1-201ENST00000522557 RNF13O43567 381 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms