RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ROCK1Q13464 1354 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 GOLGA6L4A6NEF3 574 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 LOC110117498-PIK3R3F6TDL0 507 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 ATP8B1O43520 1251 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 DFNA5O60443 496 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 SLC25A27O95847 323 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 PCCAP05165 728 aaPredicted RBP3.28□□□□□ -1.88
SKP1-208ENST00000521216 NCK1P16333 377 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 BTCP35070 178 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 DDOSTP39656 456 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 EFNB2P52799 333 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 ARPC4P59998 168 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 MRPL28Q13084 256 aaKnown RBP3.28□□□□□ -1.88
SKP1-208ENST00000521216 DUSP7Q16829 419 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 CARD16Q5EG05 197 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 OR4F3Q6IEY1 312 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 MDS2Q8NDY4 140 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 CCDC54Q8NEL0 328 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 IPMKQ8NFU5 416 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 OR51G1Q8NGK1 321 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 ACER1Q8TDN7 264 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 SRSF12Q8WXF0 261 aaKnown RBP3.28□□□□□ -1.88
SKP1-208ENST00000521216 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.28□□□□□ -1.887e-9■■■■■ 72.6
SKP1-208ENST00000521216 ZNF75CPQ92670 426 aaPredicted RBP3.28□□□□□ -1.88
SKP1-208ENST00000521216 UFD1Q92890 307 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 EMG1Q92979 244 aaKnown RBP3.28□□□□□ -1.88
SKP1-208ENST00000521216 RNF185Q96GF1 192 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 FCRL1Q96LA6 429 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 SLC38A2Q96QD8 506 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 ZSCAN5AQ9BUG6 496 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 SLC7A5P2Q9GIP4 190 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 CLMPQ9H6B4 373 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 EML4Q9HC35 981 aaKnown RBP3.28□□□□□ -1.88
SKP1-208ENST00000521216 DEC1Q9P2X7 70 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 TP53TG5Q9Y2B4 290 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 SLC25A15Q9Y619 301 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 NACADO15069 1562 aa3.28□□□□□ -1.88
SKP1-208ENST00000521216 VIRMAQ69YN4 1812 aaKnown RBP3.28□□□□□ -1.88
SKP1-208ENST00000521216 PDS5BQ9NTI5 1447 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 NKX2-6A6NCS4 301 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 MAGEB4O15481 346 aaPredicted RBP3.27□□□□□ -1.89
SKP1-208ENST00000521216 CYTH3O43739 400 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 MTX2O75431 263 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 YEATS4O95619 227 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 FGFR1OPO95684 399 aaKnown RBP3.27□□□□□ -1.89
SKP1-208ENST00000521216 RPSAP08865 295 aaKnown RBP3.27□□□□□ -1.89
SKP1-208ENST00000521216 SFTPCP11686 197 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 RPS2P15880 293 aaKnown RBP3.27□□□□□ -1.89
SKP1-208ENST00000521216 U2AF2P26368 475 aaKnown RBP eCLIP3.27□□□□□ -1.891e-9■■■■□ 21.1
SKP1-208ENST00000521216 CCR1P32246 355 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 QARSP47897 775 aaKnown RBP3.27□□□□□ -1.89
SKP1-208ENST00000521216 KLRB1Q12918 225 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 VGLL4Q14135 290 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 RABL6Q3YEC7 729 aaPredicted RBP3.27□□□□□ -1.89
SKP1-208ENST00000521216 LRRC23Q53EV4 343 aaPredicted RBP3.27□□□□□ -1.89
SKP1-208ENST00000521216 C1orf220Q5T0J3 134 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 GALNT17Q6IS24 598 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 ZSCAN25Q6NSZ9 544 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 NLRP9Q7RTR0 991 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 ECHDC2Q86YB7 292 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 OR6X1Q8NH79 312 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 ITCHQ96J02 903 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 RPRD1AQ96P16 312 aaPredicted RBP3.27□□□□□ -1.89
SKP1-208ENST00000521216 OSBPL10Q9BXB5 764 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 SMOXQ9NWM0 555 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 UBAP1Q9NZ09 502 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 ARHGAP31Q2M1Z3 1444 aa3.27□□□□□ -1.89
SKP1-208ENST00000521216 SMG6Q86US8 1419 aaKnown RBP3.27□□□□□ -1.89
SKP1-208ENST00000521216 PNPLA6Q8IY17 1366 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 MAP3K5Q99683 1374 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 NACAE9PAV3 2078 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 GAKO14976 1311 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 CCDC171Q6TFL3 1326 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 ARHGAP21Q5T5U3 1957 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 A0A0G2JN53 185 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 LINC00854A0A1B0GVQ3 168 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 KRTAP4-16G5E9R7 235 aaPredicted RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 CASQ2O14958 399 aaPredicted RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 RTL8CO15255 209 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 POLR3GO15318 223 aaPredicted RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 CRISP2P16562 243 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 IL12AP29459 219 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 CCT6AP40227 531 aaKnown RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 SLC26A3P40879 764 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 PPOXP50336 477 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 BASP1P80723 227 aaKnown RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 PPIDQ08752 370 aaKnown RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 NCBP1Q09161 790 aaKnown RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 PDZK1Q5T2W1 519 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 CTRB2Q6GPI1 263 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 PMF1Q6P1K2 205 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 COX15Q7KZN9 410 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 MFSD9Q8NBP5 474 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 CDKL2Q92772 493 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 SLC35B4Q969S0 331 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 OXGR1Q96P68 337 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 PELOQ9BRX2 385 aaKnown RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 PLA2G2FQ9BZM2 168 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms