RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 CDK20Q8IZL9 346 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 C17orf78Q8N4C9 275 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 VPS37AQ8NEZ2 397 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 SLC25A36Q96CQ1 311 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 FBXO17Q96EF6 278 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 ZHX1-C8orf76Q96EF9 292 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 TRMT61AQ96FX7 289 aaKnown RBP7.48□□□□□ -1.21
PABPC1-213ENST00000519848 RADILQ96JH8 1075 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 SLC38A2Q96QD8 506 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 EMC6Q9BV81 110 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 BCL2L10Q9HD36 194 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 MED29Q9NX70 200 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 POU2F3Q9UKI9 436 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 AMDHD2Q9Y303 409 aa7.48□□□□□ -1.21
PABPC1-213ENST00000519848 SPIN1Q9Y657 262 aaPredicted RBP7.48□□□□□ -1.21
PABPC1-213ENST00000519848 MXRA5Q9NR99 2828 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 COL6A5A8TX70 2615 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 A0A096LPI6 279 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 ARPC4-TTLL3A0A0A6YYG9 625 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 IGHV2OR16-5A0A0B4J2B6 119 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 A0A0B4J2E0 115 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 A0A1B0GX12 115 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 LRP5LA4QPB2 252 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 TRPC5OSA6NMA1 111 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 KRT75O95678 551 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 IGKV3-15P01624 115 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 THBS4P35443 961 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 GZMMP51124 257 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 IDH3GP51553 393 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-213ENST00000519848 SLC18A1P54219 525 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 AQP5P55064 265 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 PCBP3P57721 371 aaKnown RBP7.47□□□□□ -1.21
PABPC1-213ENST00000519848 TRIP10Q15642 601 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 GSTA3Q16772 222 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 ZSWIM7Q19AV6 140 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 CEACAM16Q2WEN9 425 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 ZNF311Q5JNZ3 666 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 CARD17Q5XLA6 110 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 ZNF544Q6NX49 715 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 ANKRD16Q6P6B7 361 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 DHRS4L2Q6PKH6 230 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 MSANTD1Q6ZTZ1 278 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 MDP1Q86V88 176 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 LRP11Q86VZ4 500 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 ZNF584Q8IVC4 421 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 FBXL14Q8N1E6 418 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 SMYD1Q8NB12 490 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 GLB1L3Q8NCI6 653 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-213ENST00000519848 MFSD8Q8NHS3 518 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 GTF3AQ92664 365 aaKnown RBP7.47□□□□□ -1.21
PABPC1-213ENST00000519848 MSI2Q96DH6 328 aaKnown RBP7.47□□□□□ -1.21
PABPC1-213ENST00000519848 SLC41A3Q96GZ6 507 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 ITCHQ96J02 903 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 FOXN4Q96NZ1 517 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 TNFRSF13CQ96RJ3 184 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 SF3B5Q9BWJ5 86 aaKnown RBP7.47□□□□□ -1.21
PABPC1-213ENST00000519848 BPESC1Q9GZL8 116 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 ALG2Q9H553 416 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 GPR35Q9HC97 309 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 NGBQ9NPG2 151 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 FANCFQ9NPI8 374 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 CA10Q9NS85 328 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 B3GNT2Q9NY97 397 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 CCDC167Q9P0B6 97 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 UPB1Q9UBR1 384 aa7.47□□□□□ -1.21
PABPC1-213ENST00000519848 A0A0G2JPF8 293 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 A8MV72 311 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-213ENST00000519848 HNRNPCL2B2RXH8 293 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 HNRNPCL3B7ZW38 293 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 RPL36A-HNRNPH2H7BZ11 118 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 FXYD1O00168 92 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 FBP2O00757 339 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 PHF1O43189 567 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-213ENST00000519848 EIF1BO60739 113 aaKnown RBP7.46□□□□□ -1.22
PABPC1-213ENST00000519848 HNRNPCL1O60812 293 aaKnown RBP7.46□□□□□ -1.22
PABPC1-213ENST00000519848 NCR1O76036 304 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 MFN2O95140 757 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 SNUPNO95149 360 aaKnown RBP7.46□□□□□ -1.22
PABPC1-213ENST00000519848 AHSA1O95433 338 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 HLA-HP01893 362 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 PATE4P0C8F1 98 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 HNRNPCL4P0DMR1 293 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 GPX2P18283 190 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 TNFRSF1BP20333 461 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 CD247P20963 164 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 CXCR1P25024 350 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 NR4A2P43354 598 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 EFNA4P52798 201 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 CDH12P55289 794 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 MTPNP58546 118 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 PRPS1P60891 318 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 GGTLC2Q14390 218 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 MAD2L1BPQ15013 274 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-213ENST00000519848 NRF1Q16656 503 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 DUSP7Q16829 419 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 OR7E24Q6IFN5 339 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 CGB2Q6NT52 195 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 HMBOX1Q6NT76 420 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 KLHL24Q6TFL4 600 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 ZNF440Q8IYI8 595 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms