RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 EXOC3L2Q2M3D2 409 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 FILIP1LQ4L180 1135 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 ZSCAN25Q6NSZ9 544 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 DHDDSQ86SQ9 333 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 OR5D13Q8NGL4 314 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 DTX3LQ8TDB6 740 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 RSPH1Q8WYR4 309 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 LRRC58Q96CX6 371 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 CXorf40BQ96DE9 158 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 NPAS2Q99743 824 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 MMP17Q9ULZ9 603 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 KCNIP3Q9Y2W7 256 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 NOTCH2Q04721 2471 aa3.64□□□□□ -1.83
PTPN12-213ENST00000519553 C11orf94C9JXX5 98 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 DLGAP1O14490 977 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 DFNA5O60443 496 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 CAPN1P07384 714 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 PNMA6AP0CW24 399 aaPredicted RBP3.63□□□□□ -1.83
PTPN12-213ENST00000519553 IFNAR2P48551 515 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 ATP1B3P54709 279 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 GGTLC2Q14390 218 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 PDK3Q15120 406 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 RSPO1Q2MKA7 263 aaPredicted RBP3.63□□□□□ -1.83
PTPN12-213ENST00000519553 RFX4Q33E94 735 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 TRIM69Q86WT6 500 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 RBM14Q96PK6 669 aaKnown RBP3.63□□□□□ -1.83
PTPN12-213ENST00000519553 TMEM43Q9BTV4 400 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 PLA2G2FQ9BZM2 168 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 VCXQ9H320 206 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 CDC42EP4Q9H3Q1 356 aaKnown RBP3.63□□□□□ -1.83
PTPN12-213ENST00000519553 CLMPQ9H6B4 373 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 GLRX2Q9NS18 164 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 XCL2Q9UBD3 114 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 ADAM28Q9UKQ2 775 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 TBX21Q9UL17 535 aa3.63□□□□□ -1.83
PTPN12-213ENST00000519553 ZNFX1Q9P2E3 1918 aaKnown RBP3.62□□□□□ -1.83
PTPN12-213ENST00000519553 ATP10AO60312 1499 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 IGLV3-22A0A075B6J6 115 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 IGKV2D-24A0A075B6R9 120 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 OR5B21A6NL26 309 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 SLC31A2O15432 143 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 ZNF324O75467 553 aaPredicted RBP3.62□□□□□ -1.83
PTPN12-213ENST00000519553 SUPT3HO75486 399 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 IGLV2-23P01705 113 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 PFN3P60673 137 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 UBE2HP62256 183 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 FGL1Q08830 312 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 PDIA2Q13087 525 aaKnown RBP3.62□□□□□ -1.83
PTPN12-213ENST00000519553 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
PTPN12-213ENST00000519553 ECHDC2Q86YB7 292 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 FNDC5Q8NAU1 212 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 FAM110BQ8TC76 370 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 ASB9Q96DX5 294 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 GPR61Q9BZJ8 451 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 GBA3Q9H227 469 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 TPK1Q9H3S4 243 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 GORASP2Q9H8Y8 452 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 ZFP14Q9HCL3 533 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 POLE4Q9NR33 117 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 ZNF226Q9NYT6 803 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 CALYQ9NYX4 217 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 BFARQ9NZS9 450 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 CDH9Q9ULB4 789 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 HEBP2Q9Y5Z4 205 aa3.62□□□□□ -1.83
PTPN12-213ENST00000519553 WISP3O95389 354 aaPredicted RBP3.61□□□□□ -1.83
PTPN12-213ENST00000519553 PLEKP08567 350 aaPredicted RBP3.61□□□□□ -1.83
PTPN12-213ENST00000519553 DBTP11182 482 aaKnown RBP3.61□□□□□ -1.83
PTPN12-213ENST00000519553 SLC26A3P40879 764 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 CXCL5P42830 114 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 FGF8P55075 233 aaPredicted RBP3.61□□□□□ -1.83
PTPN12-213ENST00000519553 PTGES3Q15185 160 aaKnown RBP3.61□□□□□ -1.83
PTPN12-213ENST00000519553 SGCAQ16586 387 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 OR52W1Q6IF63 320 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 ENPP6Q6UWR7 440 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 THOC6Q86W42 341 aaKnown RBP3.61□□□□□ -1.83
PTPN12-213ENST00000519553 C12orf56Q8IXR9 622 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 VN1R2Q8NFZ6 395 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 ZNF596Q8TC21 504 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 SCFD1Q8WVM8 642 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 TRIM44Q96DX7 344 aaPredicted RBP3.61□□□□□ -1.83
PTPN12-213ENST00000519553 CEP170P1Q96L14 293 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 FAIM2Q9BWQ8 316 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 DNTTIP1Q9H147 329 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 FANCIQ9NVI1 1328 aa3.61□□□□□ -1.83
PTPN12-213ENST00000519553 PEX7O00628 323 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 MTX2O75431 263 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 ALDOBP05062 364 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 GLRA2P23416 452 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 MAGEA8P43361 318 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 TFPI2P48307 235 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 FZD2Q14332 565 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 GUCA2BQ16661 112 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 DGUOKQ16854 277 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 LCN12Q6JVE5 192 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 UQCC3Q6UW78 93 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 NUDCD3Q8IVD9 361 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 SAXO1Q8IYX7 474 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 MCOLN3Q8TDD5 553 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 SMARCD2Q92925 531 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 C10orf35Q96D05 121 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms