RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ZNF583	Q96ND8	569 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	ALKBH3	Q96Q83	286 aa	Predicted RBP	21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	EFCAB1	Q9HAE3	211 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	ZNF701	Q9NV72	531 aa	Predicted RBP	21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	SLC7A7	Q9UM01	511 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	SH3GLB1	Q9Y371	365 aa		21.21	■□□□□ 0.99
CNOT7-204	ENST00000518885	HIST1H2AB	P04908	130 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	COX4I1	P13073	169 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	FOXG1	P55316	489 aa	Predicted RBP	21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	NPTX1	Q15818	432 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	ETFDH	Q16134	617 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	AGAP6	Q5VW22	663 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	ANKRD16	Q6P6B7	361 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	HIST3H2A	Q7L7L0	130 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	OR1K1	Q8NGR3	316 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	MAGEE2	Q8TD90	523 aa	Predicted RBP	21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	IGFBPL1	Q8WX77	278 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	HIST1H2AC	Q93077	130 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	CMTM5	Q96DZ9	223 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	C18orf12	Q96KH6	178 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	WFDC6	Q9BQY6	131 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	BDH2	Q9BUT1	245 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	B3GAT1	Q9P2W7	334 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	SEC14L4	Q9UDX3	406 aa		21.2	■□□□□ 0.98
CNOT7-204	ENST00000518885	VPS13C	Q709C8	3753 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885		A0A1W2PR80	420 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	ELOVL7	A1L3X0	281 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	FAM171A2	A8MVW0	826 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	SHISA9	B4DS77	424 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	RPL36A-HNRNPH2	H7BZ11	118 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	ATP5J2	P56134	94 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	TAS2R41	P59536	307 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	ROR2	Q01974	943 aa	Known RBP	21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	POU3F1	Q03052	451 aa	Predicted RBP	21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	PXK	Q7Z7A4	578 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	CARM1	Q86X55	608 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	WDR31	Q8NA23	367 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	OR5J2	Q8NH18	312 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	KCNS3	Q9BQ31	491 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	GRIP2	Q9C0E4	1043 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	NANS	Q9NR45	359 aa		21.19	■□□□□ 0.98
CNOT7-204	ENST00000518885	DSCAM	O60469	2012 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	ZNF726	A6NNF4	738 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	UPK3A	O75631	287 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	ZNF432	O94892	652 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	DANCR	P0C864	163 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	AHCY	P23526	432 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	KDELR2	P33947	212 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	TBRG1	Q3YBR2	411 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	LRRC23	Q53EV4	343 aa	Predicted RBP	21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	BIVM	Q86UB2	503 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	RBM45	Q8IUH3	476 aa	Known RBP	21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	CCDC36	Q8IYA8	594 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	MICU2	Q8IYU8	434 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	POU5F2	Q8N7G0	328 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	LRR1	Q96L50	414 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	OR2M2	Q96R28	347 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	MED13L	Q71F56	2210 aa		21.18	■□□□□ 0.98
CNOT7-204	ENST00000518885	ARPC4-TTLL3	A0A0A6YYG9	625 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	MS4A18	H0YCH9	400 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	PLPP3	O14495	311 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	TRAF3IP2	O43734	574 aa	Predicted RBP	21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	THRB	P10828	461 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	BMP4	P12644	408 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	RBM34	P42696	430 aa	Known RBP	21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	MS4A18	Q3C1V0	323 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	HIKESHI	Q53FT3	197 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	CYBRD1	Q53TN4	286 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	CPLX4	Q7Z7G2	160 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	LSR	Q86X29	649 aa	Predicted RBP	21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	MOGAT1	Q96PD6	335 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	ELAC2	Q9BQ52	826 aa	Known RBP	21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	C1QTNF6	Q9BXI9	259 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	DLL4	Q9NR61	685 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	ZNF229	Q9UJW7	825 aa		21.17	■□□□□ 0.98
CNOT7-204	ENST00000518885	GSTA4	O15217	222 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	OR5F1	O95221	314 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	ADORA3	P0DMS8	318 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	CRYBA2	P53672	197 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	ZNF74	Q16587	644 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	C3orf36	Q3SXR2	165 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	ZNF544	Q6NX49	715 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	DEF8	Q6ZN54	512 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	KRTAP1-3	Q8IUG1	177 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	FBXL14	Q8N1E6	418 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	OR4D11	Q8NGI4	311 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	NEUROG1	Q92886	237 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	ADAD1	Q96M93	576 aa	Known RBP	21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885		Q96MF0	132 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	DHRS9	Q9BPW9	319 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	BARX1	Q9HBU1	254 aa	Predicted RBP	21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	CRLF2	Q9HC73	371 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	GPR35	Q9HC97	309 aa		21.16	■□□□□ 0.98
CNOT7-204	ENST00000518885	FLNA	P21333	2647 aa	Known RBP	21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	OVOL3	O00110	214 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	ENTPD5	O75356	428 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	CH25H	O95992	272 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	SOD3	P08294	240 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	UMPS	P11172	480 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	PTN	P21246	168 aa		21.15	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms