RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 GTF2F2P13984 249 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 EPCAMP16422 314 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF28P17035 718 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 AMY2BP19961 511 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACKR3P25106 362 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 MST1P26927 711 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ADORA1P30542 326 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CD80P33681 288 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 IGFALSP35858 605 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 RPL3P39023 403 aaKnown RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 RABIFP47224 123 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 GABRA4P48169 554 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 MTNR1BP49286 362 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TTPAP49638 278 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CSRP3P50461 194 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 AGFG1P52594 562 aaKnown RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF140P52738 457 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 DVL1P1P54792 670 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACTBP60709 375 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 RAC3P60763 192 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 C1QTNF8P60827 252 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACTA2P62736 377 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACTG1P63261 375 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACTG2P63267 376 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACTC1P68032 377 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACTA1P68133 377 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC25A11Q02978 314 aaKnown RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ABHD18Q0P651 414 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 PLA2G7Q13093 441 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 MTAPQ13126 283 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 UBE2V1Q13404 147 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 MRPL49Q13405 166 aaKnown RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ITPK1Q13572 414 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 RUNX2Q13950 521 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ABRAXAS2Q15018 415 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CDSNQ15517 529 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 UBE2V2Q15819 145 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TTLL9Q3SXZ7 439 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 RAB41Q5JT25 222 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 PLAC9Q5JTB6 97 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ATAT1Q5SQI0 421 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 C1orf194Q5T5A4 169 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 PRAMEF20Q5VT98 475 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAM71E1Q6IPT2 247 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF774Q6NX45 483 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 DNM1P34Q6PK57 102 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CD200R1LQ6Q8B3 271 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 B3GLCTQ6Y288 498 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF836Q6ZNA1 936 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 UBE2R2Q712K3 238 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC24A5Q71RS6 500 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ERN2Q76MJ5 926 aaKnown RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR2W3Q7Z3T1 314 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ABHD12BQ7Z5M8 362 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CMC1Q7Z7K0 106 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SERPINA11Q86U17 422 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 KCNMB4Q86W47 210 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 GPC2Q8N158 579 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 JAGN1Q8N5M9 183 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF548Q8NEK5 533 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR4K2Q8NGD2 314 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR10AD1Q8NGE0 317 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR5AP2Q8NGF4 316 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR51G2Q8NGK0 314 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR1J2Q8NGS2 313 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAM110BQ8TC76 370 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CSGALNACT1Q8TDX6 532 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 LIPHQ8WWY8 451 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SEMA4DQ92854 862 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SMARCD2Q92925 531 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 DVL3Q92997 716 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMEM159Q96B96 161 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 RAB39BQ96DA2 213 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 MYEOVQ96EZ4 313 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 GALNT14Q96FL9 552 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SCLYQ96I15 445 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 PACRGQ96M98 296 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF583Q96ND8 569 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 MCEEQ96PE7 176 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 STACQ99469 402 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CMKLR1Q99788 373 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ATF6BQ99941 703 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 NIPSNAP1Q9BPW8 284 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 NRIP2Q9BQI9 281 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 MXRA8Q9BRK3 442 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF670Q9BS34 389 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAIM2Q9BWQ8 316 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 FGFBP2Q9BYJ0 223 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CHIAQ9BZP6 476 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 C20orf85Q9H1P6 137 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 PRO1933Q9H354 126 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 FBXO44Q9H4M3 255 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 RIOX1Q9H6W3 641 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 PLAC1Q9HBJ0 212 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 IL17RBQ9NRM6 502 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 THSD1Q9NS62 852 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 C1orf109Q9NX04 203 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 GPR83Q9NYM4 423 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 TAS2R8Q9NYW2 309 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 PIPOXQ9P0Z9 390 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms