RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ZDBF2Q9HCK1 2354 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 PRRC2CQ9Y520 2896 aaKnown RBP-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 IGHV3-49A0A0A0MS15 119 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 IGHV1OR15-9A0A0B4J2B8 117 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 VSTM5A8MXK1 200 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 H3BNH8 94 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 CHST10O43529 356 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 JCHAINP01591 159 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 OPN1LWP04000 364 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 MYL3P08590 195 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 ELK4P28324 431 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 SOAT1P35610 550 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 HSD17B3P37058 310 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 ACADVLP49748 655 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 ASCL1P50553 236 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 TAS2R31P59538 309 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 BNIP1Q12981 228 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 DMC1Q14565 340 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 JMJD6Q6NYC1 403 aaPredicted RBP-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 DEGS2Q6QHC5 323 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 TMEM205Q6UW68 189 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 H2AFVQ71UI9 128 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 GET4Q7L5D6 327 aaPredicted RBP-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 MIER3Q7Z3K6 550 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 TPRA1Q86W33 373 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 OR2G3Q8NGZ4 309 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 TTC8Q8TAM2 541 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 SCFD1Q8WVM8 642 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 ATL1Q8WXF7 558 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 UBE2E3Q969T4 207 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 AURKBQ96GD4 344 aaPredicted RBP-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 CPNE1Q99829 537 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 MARVELD1Q9BSK0 173 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 ALDH8A1Q9H2A2 487 aaPredicted RBP-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 OR52D1Q9H346 318 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 SLC38A10Q9HBR0 1119 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 LRRC42Q9Y546 428 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 PCDHGA1Q9Y5H4 931 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 LHFPL6Q9Y693 200 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 HSPE1-MOB4S4R3N1 261 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 KDM6BO15054 1643 aa-2.22□□□□□ -2.76
SNORA40.16-201ENST00000517238 ATRQ13535 2644 aa-2.22□□□□□ -2.77
SNORA40.16-201ENST00000517238 HEG1Q9ULI3 1381 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 SPTBN2O15020 2390 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 TRBV6-7A0A0A0MS04 114 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 LOC100131303A0A0U1RQF7 123 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 ARRDC5A6NEK1 342 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 H3BQ85 93 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 NCR3O14931 201 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 AP5Z1O43299 807 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 OR7C2O60412 319 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 IGHV3-53P01767 116 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 FCER2P06734 321 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 CD28P10747 220 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 PAPOLAP51003 745 aaKnown RBP-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 NEK3P51956 506 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 PLK1P53350 603 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 CDH13P55290 713 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 RND3P61587 244 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 POLR2LP62875 67 aaKnown RBP-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 ZNF33AQ06730 810 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 MFGE8Q08431 387 aaPredicted RBP-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 TFCP2Q12800 502 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 LAGE3Q14657 143 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 RAB35Q15286 201 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 DPYSL2Q16555 572 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 ZBED5Q49AG3 693 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 MPPE1Q53F39 396 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 LRRC8BQ6P9F7 803 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 ATRAIDQ6UW56 229 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 DOLPP1Q86YN1 238 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 SIAH3Q8IW03 269 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 FTSJ3Q8IY81 847 aaKnown RBP-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 LINC00518Q8N0U6 118 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 SMYD1Q8NB12 490 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 OR10G3Q8NGC4 313 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 OR4C16Q8NGL9 310 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 TTC17Q96AE7 1141 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 SPACA9Q96E40 222 aaPredicted RBP-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 GALNT14Q96FL9 552 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 VMP1Q96GC9 406 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 HPDLQ96IR7 371 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 TRIB3Q96RU7 358 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 P2RY13Q9BPV8 354 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 NAT9Q9BTE0 207 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 AICDAQ9GZX7 198 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 NEUROG2Q9H2A3 272 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 SRMSQ9H3Y6 488 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 C8orf17Q9NRJ1 99 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 PAK1IP1Q9NWT1 392 aaPredicted RBP-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 TRAF3IP3Q9Y228 551 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 FAM50BQ9Y247 325 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 GPR52Q9Y2T5 361 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 GTF3C3Q9Y5Q9 886 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 TRPV2Q9Y5S1 764 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 V9GY05 133 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 PLXNA4Q9HCM2 1894 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 CSMD3Q7Z407 3707 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 ARAP3Q8WWN8 1544 aa-2.23□□□□□ -2.77
SNORA40.16-201ENST00000517238 GLI3P10071 1580 aa-2.23□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms