RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 OCMP0CE72 109 aaPredicted RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 CD8BP10966 210 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 NAGAP17050 411 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 TSPAN8P19075 237 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 NCF2P19878 526 aaPredicted RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 DDCP20711 480 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 MAOAP21397 527 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 MATN1P21941 496 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 CERS1P27544 350 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ADH6P28332 368 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 TIA1P31483 386 aaKnown RBP eCLIP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 RCVRNP35243 200 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 HPCAL1P37235 193 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 XKP51811 444 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 FOXA1P55317 472 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 NME5P56597 212 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 OR4D2P58180 307 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ERVK-8P63133 956 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 RAE1P78406 368 aaKnown RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 MAT1AQ00266 395 aaKnown RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 PLIN5Q00G26 463 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF763Q0D2J5 394 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 FUT7Q11130 342 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 STX4Q12846 297 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 SLC13A2Q13183 592 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 SELENBP1Q13228 472 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 DDX39BQ13838 428 aaKnown RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 PDE7AQ13946 482 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 TRIM25Q14258 630 aaKnown RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 FXNQ16595 210 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 SYT16Q17RD7 645 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 DPY19L1Q2PZI1 675 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ATP6AP1LQ52LC2 224 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 RFTN2Q52LD8 501 aaPredicted RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 CYBRD1Q53TN4 286 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 SGO1Q5FBB7 561 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 C6orf136Q5SQH8 315 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 FAM71E1Q6IPT2 247 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 LAIR2Q6ISS4 152 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 LCN8Q6JVE9 175 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ZCCHC12Q6PEW1 402 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF773Q6PK81 442 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ENPP6Q6UWR7 440 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 HSDL2Q6YN16 418 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF793Q6ZN11 406 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 LARP4Q71RC2 724 aaKnown RBP eCLIP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 CCDC80Q76M96 950 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 SPATA19Q7Z5L4 167 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 RETREG3Q86VR2 466 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 NDUFA11Q86Y39 141 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 FUNDC1Q8IVP5 155 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 PARP8Q8N3A8 854 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 C1orf52Q8N6N3 182 aaKnown RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 RNF148Q8N7C7 305 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 GLB1L3Q8NCI6 653 aaPredicted RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 APCDD1LQ8NCL9 501 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 NFAM1Q8NET5 270 aaPredicted RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 VPS37AQ8NEZ2 397 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 B3GNT7Q8NFL0 401 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 OR5T3Q8NGG3 340 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 PSMA8Q8TAA3 256 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 NUBPLQ8TB37 319 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF675Q8TD23 568 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 CHAC2Q8WUX2 184 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 TWIST2Q8WVJ9 160 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ITLN1Q8WWA0 313 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 RIT1Q92963 219 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 POP5Q969H6 163 aaKnown RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 MUL1Q969V5 352 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 TAMM41Q96BW9 452 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 EFHD2Q96C19 240 aaPredicted RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 WDR89Q96FK6 387 aaPredicted RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 VMP1Q96GC9 406 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 APIPQ96GX9 242 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 FBXL20Q96IG2 436 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 EGLN2Q96KS0 407 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 SGCZQ96LD1 299 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 C17orf77Q96MU5 243 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF681Q96N22 645 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 DGAT2Q96PD7 388 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 MAPKAP1Q9BPZ7 522 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ADI1Q9BV57 179 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 NUF2Q9BZD4 464 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 PAIP1Q9H074 479 aaKnown RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 RACGAP1Q9H0H5 632 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 OR10A4Q9H209 315 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 SEMA6AQ9H2E6 1030 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 TPK1Q9H3S4 243 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 TUBB1Q9H4B7 451 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 MEAF6Q9HAF1 191 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 CXorf21Q9HAI6 301 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 SLC35C2Q9NQQ7 365 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 NECTIN3Q9NQS3 549 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 PRTFDC1Q9NRG1 225 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 FARSBQ9NSD9 589 aaKnown RBP2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 GIMAP4Q9NUV9 329 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ATAD3AQ9NVI7 634 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 ARMC1Q9NVT9 282 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 NTMQ9P121 344 aa2.68□□□□□ -1.98
SCARNA13-201ENST00000516672 CLCF1Q9UBD9 225 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms