RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 TTC5Q8N0Z6 440 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 SVOPLQ8N434 492 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 SUMF2Q8NBJ7 301 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 OR10A7Q8NGE5 316 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 BLOC1S5Q8TDH9 187 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 IL22RA2Q969J5 263 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 SLC6A7Q99884 636 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 CTRCQ99895 268 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 GAL3ST1Q99999 423 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 ZNF416Q9BWM5 594 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 PORCNQ9H237 461 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 SLC25A22Q9H936 323 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 TREM2Q9NZC2 230 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 TBX21Q9UL17 535 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 ASF1AQ9Y294 204 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 GSTK1Q9Y2Q3 226 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 MFHAS1Q9Y4C4 1052 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 UGT2A1Q9Y4X1 527 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 CACNG2Q9Y698 323 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 BPTFQ12830 3046 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 FRMPD4Q14CM0 1322 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 RPAP1Q9BWH6 1393 aaPredicted RBP2.31□□□□□ -2.04
LINC01088-211ENST00000515597 USP9XQ93008 2570 aaPredicted RBP2.31□□□□□ -2.04
LINC01088-211ENST00000515597 LOC285556D6RIA3 1793 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 ECM29Q5VYK3 1845 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 LOC400499M0QZD8 3231 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 IGLV3-16A0A075B6K0 115 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 PSMB11A5LHX3 300 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 KIF2AO00139 706 aaPredicted RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 MAPK13O15264 365 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 NPIPB7O75200 414 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 ZNF780AO75290 641 aaPredicted RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 MBD3O95983 291 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 H2BFMP0C1H6 154 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 TOP1P11387 765 aaKnown RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 TPSB2P20231 275 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 ADSSP30520 456 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 NUDT1P36639 197 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 CSNK1DP48730 415 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 ACADVLP49748 655 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 PPOXP50336 477 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 AP3M2P53677 418 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 PLA2G16P53816 162 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 EWSR1Q01844 656 aaKnown RBP eCLIP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 CUL1Q13616 776 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 TPSAB1Q15661 275 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 TPD52L1Q16890 204 aaPredicted RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 CCDC57Q2TAC2 916 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 PAGE3Q5JUK9 113 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 C1orf146Q5VVC0 180 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 AFTPHQ6ULP2 937 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 GDPD3Q7L5L3 318 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 KIAA1328Q86T90 577 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 DHRSXQ8N5I4 330 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 FAM71E2Q8N5Q1 922 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 DENND6BQ8NEG7 585 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 OR51G2Q8NGK0 314 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 PAQR8Q8TEZ7 354 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 PIGCQ92535 297 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 RPL3LQ92901 407 aaKnown RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 MYDGFQ969H8 173 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 RTBDNQ9BSG5 229 aaPredicted RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 CHRDL1Q9BU40 450 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 NXF5Q9H1B4 397 aaKnown RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 NXF3Q9H4D5 531 aaKnown RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 CYTL1Q9NRR1 136 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 AIG1Q9NVV5 245 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 GNG12Q9UBI6 72 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 TBK1Q9UHD2 729 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 ZNF225Q9UK10 706 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 ROCK2O75116 1388 aaKnown RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 ARAP2Q8WZ64 1704 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 PTPRFP10586 1907 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 HELZ2Q9BYK8 2649 aaKnown RBP2.3□□□□□ -2.04
LINC01088-211ENST00000515597 TENM4Q6N022 2769 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 FRYLO94915 3013 aa2.3□□□□□ -2.04
LINC01088-211ENST00000515597 OTOGLQ3ZCN5 2332 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 ATG2AQ2TAZ0 1938 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 ASTN1O14525 1302 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 CLSPNQ9HAW4 1339 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 TRBV6-6A0A0A6YYG2 114 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 GJE1A6NN92 205 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 NPIPA7E9PJI5 369 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 CNMDO75829 334 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 WISP3O95389 354 aaPredicted RBP2.29□□□□□ -2.04
LINC01088-211ENST00000515597 AK1P00568 194 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 NPIPA8P0DM63 369 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 CYBAP13498 195 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 HTR1FP30939 366 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 FGF9P31371 208 aaPredicted RBP2.29□□□□□ -2.04
LINC01088-211ENST00000515597 CTRLP40313 264 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 PRPS1P60891 318 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 GPNMBQ14956 572 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 TATDN3Q17R31 274 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 HSP90AA5PQ58FG0 334 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 DNAJC21Q5F1R6 531 aaKnown RBP2.29□□□□□ -2.04
LINC01088-211ENST00000515597 BLOC1S2Q6QNY1 142 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 ACOT7LQ6ZUV0 252 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 PPP1R42Q7Z4L9 355 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms