RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 FKBP6O75344 327 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 TSPAN19P0C672 248 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 AHCYP23526 432 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 UQCRC1P31930 480 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 CD79BP40259 229 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 LIMS1P48059 325 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 LSM11P83369 360 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNF8-215ENST00000515572 P2RY6Q15077 328 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 MS4A18Q3C1V0 323 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 TBPL2Q6SJ96 375 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 CASP12Q6UXS9 341 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 OAFQ86UD1 273 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 KDM8Q8N371 416 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 ZIC4Q8N9L1 334 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 UTP4Q969X6 686 aaKnown RBP10.55□□□□□ -0.72
SNF8-215ENST00000515572 ZNF775Q96BV0 537 aaPredicted RBP10.55□□□□□ -0.72
SNF8-215ENST00000515572 NDEL1Q9GZM8 345 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 SLC24A3Q9HC58 644 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 NPDC1Q9NQX5 325 aaPredicted RBP10.55□□□□□ -0.72
SNF8-215ENST00000515572 TAS2R5Q9NYW4 299 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 HIF3AQ9Y2N7 669 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 LYVE1Q9Y5Y7 322 aa10.55□□□□□ -0.72
SNF8-215ENST00000515572 BLOC1S5-TXNDC5H3BN57 136 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 RNF13O43567 381 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 TRAF3IP2O43734 574 aaPredicted RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 HPRP00739 348 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 CST1P01037 141 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 POU2F1P14859 743 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 IGFBP2P18065 325 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 MAKP20794 623 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 GPR4P46093 362 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 OMPP47874 163 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 PRPS1P60891 318 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 RPS4XP62701 263 aaKnown RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 POU3F1Q03052 451 aaPredicted RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 RPL18Q07020 188 aaKnown RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 CCNIQ14094 377 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 SEC23BQ15437 767 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 TAF11Q15544 211 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 ZSCAN26Q16670 478 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 EXOC3L2Q2M3D2 409 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 FREM1Q5H8C1 2179 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 FBXW9Q5XUX1 488 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 ZNF474Q6S9Z5 364 aaPredicted RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 Q6ZT83 130 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 ABHD12BQ7Z5M8 362 aaPredicted RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 C10orf67Q8IYJ2 551 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 GABRG1Q8N1C3 465 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 POMGNT2Q8NAT1 580 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 OR4C15Q8NGM1 316 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 DUS3LQ96G46 650 aaKnown RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 FAM46AQ96IP4 442 aaKnown RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 ADAD1Q96M93 576 aaKnown RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 ZNF385AQ96PM9 386 aaKnown RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 ARMC1Q9NVT9 282 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 MALT1Q9UDY8 824 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 SAMHD1Q9Y3Z3 626 aaKnown RBP10.54□□□□□ -0.72
SNF8-215ENST00000515572 ICE1Q9Y2F5 2266 aa10.54□□□□□ -0.72
SNF8-215ENST00000515572 USP9YO00507 2555 aaPredicted RBP10.53□□□□□ -0.72
SNF8-215ENST00000515572 A0A1W2PRG6 482 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 NPIPB13A6NJU9 1138 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 NPIPB4C9JG80 1138 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 C11orf98E9PRG8 122 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 C16orf97H3BN30 126 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 C19orf84I3L1E1 186 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 GNGT2O14610 69 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 OR10H3O60404 316 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 CCNB2O95067 398 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 GRNP28799 593 aaKnown RBP10.53□□□□□ -0.72
SNF8-215ENST00000515572 NTF4P34130 210 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 ERFP50548 548 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 CLDN17P56750 224 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 ACTR3P61158 418 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 ZBED5Q49AG3 693 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 C1orf94Q6P1W5 598 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 NIPAL3Q6P499 406 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 NHLRC1Q6VVB1 395 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 HDDC2Q7Z4H3 204 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 UBE2J2Q8N2K1 259 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 ACBD4Q8NC06 268 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 SLCO4A1Q96BD0 722 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 SPOCK3Q9BQ16 436 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 USB1Q9BQ65 265 aaKnown RBP10.53□□□□□ -0.72
SNF8-215ENST00000515572 HDHD5Q9BXW7 423 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 LINC00470Q9BZP3 86 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 ENKD1Q9H0I2 346 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 OR10A4Q9H209 315 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 SLCO5A1Q9H2Y9 848 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 INIPQ9NRY2 104 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 ASB6Q9NWX5 421 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 UPB1Q9UBR1 384 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 DNAJB9Q9UBS3 223 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 PRSS50Q9UI38 385 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 GPR52Q9Y2T5 361 aa10.53□□□□□ -0.72
SNF8-215ENST00000515572 BAHCC1Q9P281 2608 aa10.52□□□□□ -0.73
SNF8-215ENST00000515572 ARRDC5A6NEK1 342 aa10.52□□□□□ -0.73
SNF8-215ENST00000515572 ZNF726A6NNF4 738 aa10.52□□□□□ -0.73
SNF8-215ENST00000515572 CDC42EP2O14613 210 aa10.52□□□□□ -0.73
SNF8-215ENST00000515572 CLOCKO15516 846 aa10.52□□□□□ -0.73
SNF8-215ENST00000515572 HNRNPRO43390 633 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms