RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 MRPS11P82912 194 aaKnown RBP9.55□□□□□ -0.88
RNF4-218ENST00000513284 ARF1P84077 181 aaKnown RBP9.55□□□□□ -0.88
RNF4-218ENST00000513284 MVKQ03426 396 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 LRRC74AQ0VAA2 488 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 SLC9A3R2Q15599 337 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 GPAT3Q53EU6 434 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 KLF17Q5JT82 389 aaPredicted RBP9.55□□□□□ -0.88
RNF4-218ENST00000513284 DCAF12L2Q5VW00 463 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 CREB3L2Q70SY1 520 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 ABHD12BQ7Z5M8 362 aaPredicted RBP9.55□□□□□ -0.88
RNF4-218ENST00000513284 EPHX4Q8IUS5 362 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 CMIPQ8IY22 773 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 LRRC34Q8IZ02 419 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 CLECL1Q8IZS7 167 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 ROPN1LQ96C74 230 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 DDIT4LQ96D03 193 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 ZNF75AQ96N20 296 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 ALKBH3Q96Q83 286 aaPredicted RBP9.55□□□□□ -0.88
RNF4-218ENST00000513284 SYT3Q9BQG1 590 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 SF3B5Q9BWJ5 86 aaKnown RBP9.55□□□□□ -0.88
RNF4-218ENST00000513284 MARCOQ9UEW3 520 aaPredicted RBP9.55□□□□□ -0.88
RNF4-218ENST00000513284 OSGIN1Q9UJX0 560 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 PRDM4Q9UKN5 801 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 TMED7Q9Y3B3 224 aa9.55□□□□□ -0.88
RNF4-218ENST00000513284 CLDN24A6NM45 220 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 ZNF587BE7ETH6 402 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 AP3D1O14617 1153 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 ZNF500O60304 480 aaPredicted RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 CDC14BO60729 498 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 IGHV2-5P01817 119 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 SERPINE1P05121 402 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 NAT2P11245 290 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 ZNF35P13682 527 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 ARRB2P32121 409 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 IDH2P48735 452 aaKnown RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 KCNJ10P78508 379 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 BAMBIQ13145 260 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 OTUD3Q5T2D3 398 aaPredicted RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 TYW3Q6IPR3 259 aaKnown RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 TNFAIP8L2Q6P589 184 aaPredicted RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 MDP1Q86V88 176 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 BHLHE22Q8NFJ8 381 aaPredicted RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 TESCQ96BS2 214 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 MS4A3Q96HJ5 214 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 ZNF317Q96PQ6 595 aaPredicted RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 TMEM109Q9BVC6 243 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 CACYBPQ9HB71 228 aaKnown RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 CRLF2Q9HC73 371 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 B3GNT2Q9NY97 397 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.54□□□□□ -0.88
RNF4-218ENST00000513284 FZR1Q9UM11 496 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 RAP2CQ9Y3L5 183 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 MMP24Q9Y5R2 645 aa9.54□□□□□ -0.88
RNF4-218ENST00000513284 V9GYY5 206 aaPredicted RBP9.54□□□□□ -0.88
RNF4-218ENST00000513284 LIPT2A6NK58 231 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 AQP7P3A6NL99 342 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 E9PBE3 544 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 RPL36A-HNRNPH2H7BZ11 118 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 ZNF208O43345 1280 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 TYROBPO43914 113 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 KRT33AO76009 404 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 LBPP18428 481 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 S100A3P33764 101 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 GLRXP35754 106 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 ETV4P43268 484 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 POLR2HP52434 150 aaKnown RBP9.53□□□□□ -0.88
RNF4-218ENST00000513284 ABCE1P61221 599 aaKnown RBP9.53□□□□□ -0.88
RNF4-218ENST00000513284 ROR2Q01974 943 aaKnown RBP9.53□□□□□ -0.88
RNF4-218ENST00000513284 NPRL3Q12980 569 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 CEACAM7Q14002 265 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 FXNQ16595 210 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 SAXO2Q658L1 398 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 RBMS3Q6XE24 437 aaKnown RBP9.53□□□□□ -0.88
RNF4-218ENST00000513284 HMGN2P46Q86SG4 172 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 ANKRD46Q86W74 232 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 ZNF440Q8IYI8 595 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 CLEC4FQ8N1N0 589 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 MREGQ8N565 214 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 KIR3DL3Q8N743 410 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 IL17RDQ8NFM7 739 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 TMIGD2Q96BF3 282 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 NEURL3Q96EH8 262 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 CITED1Q99966 193 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 SLC35A5Q9BS91 424 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 ZNF416Q9BWM5 594 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 PARD6BQ9BYG5 372 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 LINC00470Q9BZP3 86 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 MMP27Q9H306 513 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 PIF1Q9H611 641 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 AKTIPQ9H8T0 292 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 MMP26Q9NRE1 261 aa9.53□□□□□ -0.88
RNF4-218ENST00000513284 CLDN34H7C241 214 aa9.52□□□□□ -0.89
RNF4-218ENST00000513284 TM9SF1O15321 606 aa9.52□□□□□ -0.89
RNF4-218ENST00000513284 BIRC5O15392 142 aa9.52□□□□□ -0.89
RNF4-218ENST00000513284 ZNF432O94892 652 aa9.52□□□□□ -0.89
RNF4-218ENST00000513284 IL7RP16871 459 aa9.52□□□□□ -0.89
RNF4-218ENST00000513284 TACR3P29371 465 aa9.52□□□□□ -0.89
RNF4-218ENST00000513284 ARR3P36575 388 aa9.52□□□□□ -0.89
RNF4-218ENST00000513284 RPL14P50914 215 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms