RNA–Protein interactions for RNA: ENST00000512820.5

LIMCH1-216, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-216ENST00000512820 DGLUCYQ7Z3D6 616 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 MORN4Q8NDC4 146 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 OR4K17Q8NGC6 315 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 DCUN1D4Q92564 292 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 PRRT1Q99946 306 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 C2orf42Q9NWW7 574 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SDHAF2Q9NX18 166 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 KIR2DS5A0A0G2JLQ3 304 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 A0A0G2JNG1 304 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 KIR2DS3K7RE56 304 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 AIPO00170 330 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 ZNF593O00488 134 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 FARS2O95363 451 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 CA3P07451 260 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 CDK2P24941 298 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 MAOBP27338 520 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 RPL35P42766 123 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 MMP15P51511 669 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 MEF2DQ14814 521 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 KIR2DS5Q14953 304 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 LIPNQ5VXI9 398 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 VASNQ6EMK4 673 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 NDUFAF7Q7L592 441 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 GCDHQ92947 438 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 NECAB3Q96P71 396 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 ULBP3Q9BZM4 244 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SLC6A17Q9H1V8 727 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 WDR76Q9H967 626 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 LYRM4Q9HD34 91 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SLC2A4RGQ9NR83 387 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 ZNF701Q9NV72 531 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 STEAP1Q9UHE8 339 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 LSM2Q9Y333 95 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 PAPPA2Q9BXP8 1791 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 BRWD3Q6RI45 1802 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 IFITM5A6NNB3 132 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 EFCAB7A8K855 629 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SPI1P17947 270 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 FBLP22087 321 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 GALP22466 123 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 CARD17Q5XLA6 110 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 STEAP1BQ6NZ63 245 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 FAM122CQ6P4D5 195 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 USP53Q70EK8 1073 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 TMUB2Q71RG4 321 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 LINC01555Q8NAE3 123 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SMIM4Q8WVI0 70 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 ARL11Q969Q4 196 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 DERL3Q96Q80 235 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 ZNF264O43296 627 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SDC3O75056 442 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 TP53P04637 393 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 TACR3P29371 465 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SEC61A1P61619 476 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 CYCSP99999 105 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 NKAPLQ5M9Q1 402 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 YOD1Q5VVQ6 348 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 ZNF770Q6IQ21 691 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SLC16A9Q7RTY1 509 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 PM20D2Q8IYS1 436 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 ACBD4Q8NC06 268 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 OR10K1Q8NGX5 313 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SCARB1Q8WTV0 552 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 OR1E3Q8WZA6 343 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 SEC22AQ96IW7 307 aa7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 FBXO9Q9UK97 447 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-216ENST00000512820 A0A0D9SG52 128 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 NTN1O95631 604 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 CALCBP10092 127 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 IFNGR1P15260 489 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 ATF1P18846 271 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 POU3F4P49335 361 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 TAS2R20P59543 309 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 DBPQ10586 325 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 RUNX2Q13950 521 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 SLC25A30Q5SVS4 291 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 LILRA6Q6PI73 481 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 ASB17Q8WXJ9 295 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 CPNE2Q96FN4 548 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 GPA33Q99795 319 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 RNF32Q9H0A6 362 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 OR10A5Q9H207 317 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 SLC22A7Q9Y694 548 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 TRAV1-2A0A0B4J238 106 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 CDC14CA4D256 554 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 P2RX6O15547 441 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 MPIG6BO95866 241 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 SGCAQ16586 387 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 CLPPQ16740 277 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 CLVS2Q5SYC1 327 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 ZNF362Q5T0B9 420 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 NLRC3Q7RTR2 1065 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 SLC51BQ86UW2 128 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 ZNF595Q8IYB9 648 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 NAXEQ8NCW5 288 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 KNL1Q8NG31 2342 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 OR51S1Q8NGJ8 323 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 PMM1Q92871 262 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 FAM3DQ96BQ1 224 aa7.73□□□□□ -1.17
LIMCH1-216ENST00000512820 C20orf141Q9NUB4 165 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms