RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 PPM1DO15297 605 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 OIP5O43482 229 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 DOK2O60496 412 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 TGM6O95932 706 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 T-ENOLP0DO92 83 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 EPHA8P29322 1005 aaPredicted RBP6.6□□□□□ -1.35
KDM3B-207ENST00000510866 LTC4SQ16873 150 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 HES3Q5TGS1 186 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 EIF5AL1Q6IS14 154 aaKnown RBP6.6□□□□□ -1.35
KDM3B-207ENST00000510866 GFRALQ6UXV0 394 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 DPY19L2P2Q6ZN68 376 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 PFN4Q8NHR9 129 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 SYNPRQ8TBG9 265 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 STK35Q8TDR2 534 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 SLC35A4Q96G79 324 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 SEMA4CQ9C0C4 833 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 LHPPQ9H008 270 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 SYT4Q9H2B2 425 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 MED16Q9Y2X0 877 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 PRAMEF27A3QJZ7 478 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 M0R233 179 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 SYT5O00445 386 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 KCNK2O95069 426 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 IFNA5P01569 189 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 NXPH1P58417 271 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 SEC61A1P61619 476 aaKnown RBP6.6□□□□□ -1.35
KDM3B-207ENST00000510866 GLYR1Q49A26 553 aaPredicted RBP6.6□□□□□ -1.35
KDM3B-207ENST00000510866 SLC35F3Q8IY50 421 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 CMTM1Q8IZ96 169 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 CHPT1Q8WUD6 406 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 CREB3L1Q96BA8 519 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 SLC29A1Q99808 456 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 C1QTNF6Q9BXI9 259 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 TUBB1Q9H4B7 451 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 FAM53CQ9NYF3 392 aa6.6□□□□□ -1.35
KDM3B-207ENST00000510866 TSPAN11A1L157 253 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 PRKNO60260 465 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 BCAS1O75363 584 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 KNG1P01042 644 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 NCS1P62166 190 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 CCDC58Q4VC31 144 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 NPSR1Q6W5P4 371 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 CYHR1Q6ZMK1 362 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ACBD4Q8NC06 268 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 PSMF1Q92530 271 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ZNF587Q96SQ5 575 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 METTL9Q9H1A3 318 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 TMEM38AQ9H6F2 299 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ZNF696Q9H7X3 374 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 POLE4Q9NR33 117 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 DUSP22Q9NRW4 184 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ASIC5Q9NY37 505 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 PIGBOS1A0A0B4J2F0 54 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 MT-ATP6P00846 226 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 HEXAP06865 529 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 OR8G3PP0DMU2 310 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 BCKDHBP21953 392 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 B4GALNT1Q00973 533 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 FAM53BQ14153 422 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 PCGF3Q3KNV8 242 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 FAM69AQ5T7M9 428 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 SFRP4Q6FHJ7 346 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 RETREG3Q86VR2 466 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 COMMD7Q86VX2 200 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 SORCS2Q96PQ0 1159 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 VRK1Q99986 396 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 RANBP3Q9H6Z4 567 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 CHRNA9Q9UGM1 479 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ATP23Q9Y6H3 246 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 A0A0A6YYH2 397 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 TMEM72A0PK05 275 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 A6NJ64 397 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 FIGNL2A6NMB9 653 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ZNF891A8MT65 544 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 TNFSF11O14788 317 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 TNFSF14O43557 240 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 CDK1P06493 297 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ELAVL4P26378 380 aaKnown RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 PRSS3P35030 304 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 PPICP45877 212 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 PTH2RP49190 550 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 MFAP5Q13361 173 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 SNTB2Q13425 540 aaKnown RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ZNF691Q5VV52 312 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 SLX4IPQ5VYV7 408 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 CFAP77Q6ZQR2 320 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ESPNLQ6ZVH7 1005 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 MAVSQ7Z434 540 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 PXKQ7Z7A4 578 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 MRPL41Q8IXM3 137 aaKnown RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ASCC1Q8N9N2 400 aaKnown RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 SIMC1Q8NDZ2 872 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 NT5CQ8TCD5 201 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 SP7Q8TDD2 431 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 H1FXQ92522 213 aaKnown RBP6.59□□□□□ -1.35
KDM3B-207ENST00000510866 RASD2Q96D21 266 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 BOD1Q96IK1 185 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 ZNF583Q96ND8 569 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 WDR76Q9H967 626 aa6.59□□□□□ -1.35
KDM3B-207ENST00000510866 SEMA4GQ9NTN9 838 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms