RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SMPD2O60906 423 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 LYZL6O75951 148 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 OR5F1O95221 314 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 GPIP06744 558 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 PNMTP11086 282 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 CD53P19397 219 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 MAKP20794 623 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 FXYD6P3P58550 94 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 LGALS3BPQ08380 585 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 PDK3Q15120 406 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 OR7A5Q15622 319 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 MS4A18Q3C1V0 323 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 SPATS1Q496A3 300 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 ULK3Q6PHR2 472 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 CASP12Q6UXS9 341 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 ZNF704Q6ZNC4 412 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 C20orf204Q6ZNR8 217 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 Q6ZT83 130 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 RANBP3LQ86VV4 465 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 DHFR2Q86XF0 187 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 TGIF2LYQ8IUE0 185 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 ARHGAP24Q8N264 748 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 OR4C15Q8NGM1 316 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 SLC7A13Q8TCU3 470 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 STK35Q8TDR2 534 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 CANT1Q8WVQ1 401 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 DNAJA4Q8WW22 397 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 RASSF5Q8WWW0 418 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 ZNF385AQ96PM9 386 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 SEPHS2Q99611 448 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 USB1Q9BQ65 265 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 TMEM43Q9BTV4 400 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 POTEKPQ9BYX7 375 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 CXXC4Q9H2H0 198 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 ESRP2Q9H6T0 727 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 NMNAT1Q9HAN9 279 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 TMEM27Q9HBJ8 222 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 PARPBPQ9NWS1 579 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 ADPRHL2Q9NX46 363 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 SELENONQ9NZV5 590 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 UPB1Q9UBR1 384 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 SLC9A8Q9Y2E8 581 aa7.72□□□□□ -1.17
PDLIM5-213ENST00000509357 VPS13CQ709C8 3753 aa7.71□□□□□ -1.17
PDLIM5-213ENST00000509357 ELOA3DA6NLF2 546 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 ANKRD65E5RJM6 399 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 M0R082 166 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 ARHGEF9O43307 516 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 KLF4O43474 513 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 KRT33AO76009 404 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 AHSA1O95433 338 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 IFNW1P05000 195 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 CD3EP07766 207 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 TSPAN19P0C672 248 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 ASAH2BP0C7U1 165 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 GTF2E2P29084 291 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 GRPRP30550 384 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 TAS2R41P59536 307 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 NKX6-1P78426 367 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 DBPQ10586 325 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 TRAP1Q12931 704 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 SLC17A1Q14916 467 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 LAPTM4AQ15012 233 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 TAB1Q15750 504 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 ZNF74Q16587 644 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 ELOA3BQ3SY89 546 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 OTUD3Q5T2D3 398 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 SWT1Q5T5J6 900 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 FBXW9Q5XUX1 488 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 TMEM225Q6GV28 225 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 PODNL1Q6PEZ8 512 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 FKBP9P1Q75LS8 142 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 LINGO2Q7L985 606 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 GPAT4Q86UL3 456 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 EPHX4Q8IUS5 362 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 ELOA3Q8NG57 546 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 ZNF417Q8TAU3 575 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 SLC25A36Q96CQ1 311 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 SLC47A1Q96FL8 570 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 ZNF587Q96SQ5 575 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 IL1RAPQ9NPH3 570 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 ASB6Q9NWX5 421 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 RPS6KA6Q9UK32 745 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 PRDM4Q9UKN5 801 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 SAMD4AQ9UPU9 718 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 PRRC2AP48634 2157 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 HIVEP1P15822 2718 aa7.71□□□□□ -1.18
PDLIM5-213ENST00000509357 MAP1AP78559 2803 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 TRAV36DV7A0A075B6V5 113 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 IGKV3D-15A0A087WSY6 115 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 AQP7P3A6NL99 342 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 TRAF3IP2O43734 574 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 RAD51DO75771 328 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 CNOT4O95628 575 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 CH25HO95992 272 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 IFNA14P01570 189 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 IGHV1-2P23083 117 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 OMPP47874 163 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 SLC16A1P53985 500 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 ADAM8P78325 824 aa7.7□□□□□ -1.18
PDLIM5-213ENST00000509357 IL1RL1Q01638 556 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms