RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-205	ENST00000508756	IFT88	Q13099	833 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	NRF1	Q16656	503 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	LRRC66	Q68CR7	880 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	C16orf87	Q6PH81	154 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	ANGPTL8	Q6UXH0	198 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	COX15	Q7KZN9	410 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	DHDDS	Q86SQ9	333 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	PDCL2	Q8N4E4	241 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	SYT14	Q8NB59	555 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	CATSPER1	Q8NEC5	780 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	OR51G1	Q8NGK1	321 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	OR1F12	Q8NHA8	337 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	HIST1H4G	Q99525	98 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	ZNF670	Q9BS34	389 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	PCSK1N	Q9UHG2	260 aa		4.23	□□□□□ -1.73
CHD1-205	ENST00000508756	IGHV1OR21-1	A0A087WYE8	117 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756		A0A0U1RQS6	177 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	HEATR9	A2RTY3	570 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	NKX2-6	A6NCS4	301 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	WRB	O00258	174 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	PES1	O00541	588 aa	Known RBP	4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	CTAG2	O75638	210 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	CHTF8	P0CG12	524 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	STAG3L3	P0CL85	134 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	DBT	P11182	482 aa	Known RBP	4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	MX1	P20591	662 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	HMGB2	P26583	209 aa	Known RBP	4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	SHMT2	P34897	504 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	PTGDS	P41222	190 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	SYK	P43405	635 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	OR4F3	Q6IEY1	312 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	C11orf71	Q6IPW1	123 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	MFSD6L	Q8IWD5	586 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	RDH10	Q8IZV5	341 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	KCNG3	Q8TAE7	436 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	TMEM158	Q8WZ71	300 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	ARPC1A	Q92747	370 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	SLC38A2	Q96QD8	506 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	SELENOI	Q9C0D9	397 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	IL36G	Q9NZH8	169 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	RPH3AL	Q9UNE2	315 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	PSG11	Q9UQ72	335 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	RASD1	Q9Y272	281 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	TIMM10B	Q9Y5J6	103 aa		4.22	□□□□□ -1.73
CHD1-205	ENST00000508756	ZNFX1	Q9P2E3	1918 aa	Known RBP	4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	SCN2A	Q99250	2005 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	IGKV2D-24	A0A075B6R9	120 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756		A0A0G2JLM5	398 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	NPIPA7	E9PJI5	369 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	TEX46	H3BTG2	121 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	DCTN6	O00399	190 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	LSM1	O15116	133 aa	Known RBP	4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	CXCL13	O43927	109 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	ICOSLG	O75144	302 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	LGALS2	P05162	132 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	NPIPA8	P0DM63	369 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	OR8G3P	P0DMU2	310 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	MMP11	P24347	488 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	CXCR2	P25025	360 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	CCT6A	P40227	531 aa	Known RBP	4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	PAX5	Q02548	391 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	ARHGAP19	Q14CB8	494 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	CTSL3P	Q5NE16	218 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	CARD17	Q5XLA6	110 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	C6orf89	Q6UWU4	347 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	PRSS41	Q7RTY9	318 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	FTMT	Q8N4E7	242 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	MFSD9	Q8NBP5	474 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	BPIFC	Q8NFQ6	507 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	FANK1	Q8TC84	345 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	KIAA1143	Q96AT1	154 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	MTMR9	Q96QG7	549 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	BPIFA3	Q9BQP9	254 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	VCX	Q9H320	206 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	LRRN3	Q9H3W5	708 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	MCCC2	Q9HCC0	563 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	CYTL1	Q9NRR1	136 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	SLC7A8	Q9UHI5	535 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	NPIPA1	Q9UND3	350 aa		4.21	□□□□□ -1.74
CHD1-205	ENST00000508756	MYO10	Q9HD67	2058 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	IGHV3-64D	A0A0J9YX35	117 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	FAM240B	A0A1B0GVZ2	78 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	PCP4L1	A6NKN8	68 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	FAM25E	A8MYX2	175 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	TRDC	B7Z8K6	153 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	TPST2	O60704	377 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	UPK3A	O75631	287 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	AGT	P01019	485 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	GAPDH	P04406	335 aa	Known RBP	4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	POU2F1	P14859	743 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	ETS2	P15036	469 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	TUBG1	P23258	451 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	KPNA2	P52292	529 aa	Known RBP	4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	MADCAM1	Q13477	382 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	C1orf61	Q13536	156 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	PTGES3	Q15185	160 aa	Known RBP	4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	SSX2	Q16385	188 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	SLC25A52	Q3SY17	297 aa		4.2	□□□□□ -1.74
CHD1-205	ENST00000508756	RNASEK	Q6P5S7	137 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms