RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SPAG4Q9NPE6 437 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 NANSQ9NR45 359 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 FAIMQ9NVQ4 179 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 ABCD2Q9UBJ2 740 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 ZNF229Q9UJW7 825 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 ARL2BPQ9Y2Y0 163 aa17.46■□□□□ 0.39
SFXN1-209ENST00000508290 AKAP6Q13023 2319 aa17.46■□□□□ 0.38
SFXN1-209ENST00000508290 FREM1Q5H8C1 2179 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 AKAP9Q99996 3911 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 DPRXA6NFQ7 191 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 GSTA4O15217 222 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 TRAF3IP2O43734 574 aaPredicted RBP17.45■□□□□ 0.38
SFXN1-209ENST00000508290 DCTN3O75935 186 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 HIST1H2ABP04908 130 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 PAX1P15863 534 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 ZNF672Q499Z4 452 aaPredicted RBP17.45■□□□□ 0.38
SFXN1-209ENST00000508290 ANKRD16Q6P6B7 361 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 PRSS57Q6UWY2 283 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 HIST3H2AQ7L7L0 130 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 CCDC36Q8IYA8 594 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 KDM8Q8N371 416 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 GPR137CQ8N3F9 429 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 HIST1H2ACQ93077 130 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 LRR1Q96L50 414 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 MOGAT1Q96PD6 335 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 GSX2Q9BZM3 304 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 B3GAT2Q9NPZ5 323 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 SEC14L4Q9UDX3 406 aa17.45■□□□□ 0.38
SFXN1-209ENST00000508290 MS4A18H0YCH9 400 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 PLPP3O14495 311 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 LYPD3O95274 346 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 NKX6-1P78426 367 aaPredicted RBP17.44■□□□□ 0.38
SFXN1-209ENST00000508290 POU3F1Q03052 451 aaPredicted RBP17.44■□□□□ 0.38
SFXN1-209ENST00000508290 LTBQ06643 244 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 ST3GAL3Q11203 375 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 ZP4Q12836 540 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 MS4A18Q3C1V0 323 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 DEF8Q6ZN54 512 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 OR1K1Q8NGR3 316 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 IGFBPL1Q8WX77 278 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 TPD52L3Q96J77 140 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 ADAD1Q96M93 576 aaKnown RBP17.44■□□□□ 0.38
SFXN1-209ENST00000508290 ALKBH3Q96Q83 286 aaPredicted RBP17.44■□□□□ 0.38
SFXN1-209ENST00000508290 LRRC37BQ96QE4 947 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 OR2M2Q96R28 347 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 GRIP2Q9C0E4 1043 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 NPAP1Q9NZP6 1156 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 RIMS3Q9UJD0 308 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 USP22Q9UPT9 525 aa17.44■□□□□ 0.38
SFXN1-209ENST00000508290 ARPC4-TTLL3A0A0A6YYG9 625 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 ZNF726A6NNF4 738 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 CXCR6O00574 342 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 NME4O00746 187 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 ABCD4O14678 606 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 PLAUP00749 431 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 MT-ND1P03886 318 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 THY1P04216 161 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 IFNW1P05000 195 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 UBE2NP61088 152 aaKnown RBP17.43■□□□□ 0.38
SFXN1-209ENST00000508290 ROR2Q01974 943 aaKnown RBP17.43■□□□□ 0.38
SFXN1-209ENST00000508290 C3orf36Q3SXR2 165 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 WDR88Q6ZMY6 472 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 PIGWQ7Z7B1 504 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 TMEM123Q8N131 208 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 FAM169BQ8N8A8 192 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 WDR31Q8NA23 367 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 GEMIN6Q8WXD5 167 aaKnown RBP17.43■□□□□ 0.38
SFXN1-209ENST00000508290 PRRC1Q96M27 445 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 KCTD14Q9BQ13 255 aaPredicted RBP17.43■□□□□ 0.38
SFXN1-209ENST00000508290 PRSS27Q9BQR3 290 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 NDE1Q9NXR1 346 aa17.43■□□□□ 0.38
SFXN1-209ENST00000508290 F8P00451 2351 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 ENTPD5O75356 428 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 GMNNO75496 209 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 UPK3AO75631 287 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 ADORA3P0DMS8 318 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 CD99P14209 185 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 FOSL1P15407 271 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 CBLP22681 906 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 AHCYP23526 432 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 CD40P25942 277 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 GSK3BP49841 420 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 ZNF83P51522 516 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 FOXG1P55316 489 aaPredicted RBP17.42■□□□□ 0.38
SFXN1-209ENST00000508290 PSME3P61289 254 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 RPS4XP62701 263 aaKnown RBP17.42■□□□□ 0.38
SFXN1-209ENST00000508290 ADAM8P78325 824 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 TBRG1Q3YBR2 411 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 C9orf135Q5VTT2 229 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 HDDC2Q7Z4H3 204 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 ANKS4BQ8N8V4 417 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 TMEM239Q8WW34 195 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 LIPHQ8WWY8 451 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 TMUB1Q9BVT8 246 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 ZNF701Q9NV72 531 aaPredicted RBP17.42■□□□□ 0.38
SFXN1-209ENST00000508290 RPS6KA6Q9UK32 745 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 HIVEP1P15822 2718 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 CELSR1Q9NYQ6 3014 aa17.42■□□□□ 0.38
SFXN1-209ENST00000508290 CH25HO95992 272 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 HPRP00739 348 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms