RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 ILF3Q12906 894 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 PCGF3Q3KNV8 242 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 YOD1Q5VVQ6 348 aaPredicted RBP12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 LINC00114Q6XXX2 140 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 MAMSTRQ6ZN01 415 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 TMPRSS12Q86WS5 348 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 SLC35F3Q8IY50 421 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 BVESQ8NE79 360 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 OR52R1Q8NGF1 315 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 OR1S1Q8NH92 325 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 RAB40AQ8WXH6 277 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 PHYHIPQ92561 330 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 SGTBQ96EQ0 304 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 SRMSQ9H3Y6 488 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 PILRAQ9UKJ1 303 aa12.27□□□□□ -0.45
SNCAIP-209ENST00000508017 CACNA1CQ13936 2221 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 A0A1W2PQU0 124 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 MEIS3P1A6NDR6 274 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 KRBOX1C9JBD0 128 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 H0YC42 278 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 CTNSO60931 367 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 GLSO94925 669 aaPredicted RBP12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 IFNA16P05015 189 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 CALCBP10092 127 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 PPP3CBP16298 524 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 DLX5P56178 289 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 MAT1AQ00266 395 aaKnown RBP12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 GUCA2AQ02747 115 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 SRSF5Q13243 272 aaKnown RBP12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 SGCGQ13326 291 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 KCNAB1Q14722 419 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 ZNF684Q5T5D7 378 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 LINC01590Q5TEZ4 76 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 FCRL6Q6DN72 434 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 ATRAIDQ6UW56 229 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 GSG1LQ6UXU4 331 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 MUC20Q8N307 709 aaPredicted RBP12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 CCL4L1Q8NHW4 92 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 ZNF296Q8WUU4 475 aaPredicted RBP12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 DPYSL5Q9BPU6 564 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 NMNAT2Q9BZQ4 307 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 TRIM2Q9C040 744 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 TCF7L1Q9HCS4 588 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 ZC4H2Q9NQZ6 224 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 COLEC10Q9Y6Z7 277 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 TRAV8-7A0A075B6U6 113 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 TMEM72A0PK05 275 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 GPR75O95800 540 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 CBX7O95931 251 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 GNRH1P01148 92 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 MAS1P04201 325 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 HNRNPA1P09651 372 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 GK2Q14410 553 aaPredicted RBP12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 B3GNTL1Q67FW5 361 aaPredicted RBP12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 RD3Q7Z3Z2 195 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 LRRTM1Q86UE6 522 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 GLB1L2Q8IW92 636 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 OR10AC1Q8NH08 325 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 OR8K3Q8NH51 312 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 OR10G6Q8NH81 332 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 SPPL3Q8TCT6 385 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 STK35Q8TDR2 534 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 TRIM43Q96BQ3 446 aaPredicted RBP12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 APOOQ9BUR5 198 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 FBXL21Q9UKT6 434 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 MOKQ9UQ07 419 aa12.26□□□□□ -0.45
SNCAIP-209ENST00000508017 ALPK2Q86TB3 2170 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 TMEM272A0A1B0GTI8 110 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 CYR61O00622 381 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 SLC31A1O15431 190 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 NKX2-2O95096 273 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 SPDEFO95238 335 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 PVRP15151 417 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 CALCRP30988 508 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 MRPS10P82664 201 aaKnown RBP12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 LTBQ06643 244 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 ZNF660Q6AZW8 331 aaPredicted RBP12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 LEG1Q6P5S2 330 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 OR2AK2Q8NG84 335 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 ALG12Q9BV10 488 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 SLC6A17Q9H1V8 727 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 RSPH9Q9H1X1 276 aaPredicted RBP12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 KCNK15Q9H427 330 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 FRRS1LQ9P0K9 344 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 NUP210LQ5VU65 1888 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 ARHGEF17Q96PE2 2063 aaPredicted RBP12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 A0A1B0GTQ1 180 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 UBE2QL1A1L167 161 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 F5H5P2 479 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 UPK3AO75631 287 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 AK1P00568 194 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 CDKN2AP42771 156 aaKnown RBP12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 EFNB2P52799 333 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 HTRA4P83105 476 aaPredicted RBP12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 PSG6Q00889 435 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 PDGFRLQ15198 375 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 ODF4Q2M2E3 257 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms