RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 HTR2AP28223 471 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 GCAP28676 217 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 DDOSTP39656 456 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 NCBP2P52298 156 aaKnown RBP eCLIP1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 C1orf61Q13536 156 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 USH1GQ495M9 461 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 CES3Q6UWW8 571 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 HSDL2Q6YN16 418 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 FAM92BQ6ZTR7 304 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 NCCRP1Q6ZVX7 275 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 GET4Q7L5D6 327 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 ZNF547Q8IVP9 402 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 SLC35F2Q8IXU6 374 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 ACOT4Q8N9L9 421 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 OR1N2Q8NGR9 330 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 CD300LFQ8TDQ1 290 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 OR2A5Q96R48 311 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 FOXC2Q99958 501 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 C1orf21Q9H246 121 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 IL26Q9NPH9 171 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 CTPS2Q9NRF8 586 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 CHRNA9Q9UGM1 479 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 MMP17Q9ULZ9 603 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 MEMO1Q9Y316 297 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 BRWD3Q6RI45 1802 aa1.59□□□□□ -2.16
HMGB1P29-201ENST00000505659 CARMIL3Q8ND23 1372 aa1.59□□□□□ -2.16
HMGB1P29-201ENST00000505659 YEATS2Q9ULM3 1422 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 A0A1B0GVX0 72 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 A0A1W2PP18 115 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 RPL36A-HNRNPH2H7BZ11 118 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 K7EM74 188 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 BTN3A3O00478 584 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 MPZL1O95297 269 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 AK1P00568 194 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 BGLAPP02818 100 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 CSF3P09919 207 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 GKN3PP0CG01 181 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 CMA1P23946 247 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 CA8P35219 290 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 CASP4P49662 377 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 VGLL4Q14135 290 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 COX19Q49B96 90 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 DNLZQ5SXM8 178 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 LINC00173Q6ZV60 143 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 NEGR1Q7Z3B1 354 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 TICAM2Q86XR7 235 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 CCDC65Q8IXS2 484 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 FADS6Q8N9I5 356 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 OR10T2Q8NGX3 314 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 CCDC47Q96A33 483 aaKnown RBP1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 RBMXL1Q96E39 390 aaKnown RBP1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 PDXPQ96GD0 296 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 AURKBQ96GD4 344 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 OR10C1Q96KK4 312 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 OXGR1Q96P68 337 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 REEP4Q9H6H4 257 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 RAB18Q9NP72 206 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 CALYQ9NYX4 217 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 XCL2Q9UBD3 114 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 MRPS33Q9Y291 106 aaKnown RBP1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 COL5A1P20908 1838 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 FRMPD3Q5JV73 1810 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 KDRP35968 1356 aa1.58□□□□□ -2.16
HMGB1P29-201ENST00000505659 IGHV5-51A0A0C4DH38 117 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 KIR2DS1A0A191URI9 304 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 CIB4A0PJX0 185 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 INS-IGF2F8WCM5 200 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 OXSR1O95747 527 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 PRPS2P11908 318 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 IMPDH1P20839 514 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 OMGP23515 440 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 HMGB2P26583 209 aaKnown RBP1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 RDXP35241 583 aaKnown RBP1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 IL1RL1Q01638 556 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 SYCNQ0VAF6 134 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 ASPHQ12797 758 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 SCGB2A2Q13296 93 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 KIR2DS1Q14954 304 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 OXA1LQ15070 435 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 PRSS8Q16651 343 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 ZBED5Q49AG3 693 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 C10orf120Q5SQS8 335 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 FBXW9Q5XUX1 488 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 NCR3LG1Q68D85 454 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 BRD3OSQ6XYD6 125 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 ZADH2Q8N4Q0 377 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 OR4D5Q8NGN0 318 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 FGF14Q92915 247 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 SMARCD2Q92925 531 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 NEURL3Q96EH8 262 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 C7orf34Q96L11 122 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 WFIKKN1Q96NZ8 548 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 CHAC1Q9BUX1 264 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 OSBPL11Q9BXB4 747 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 GLRX2Q9NS18 164 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 ZNF355PQ9NSJ1 428 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 SPATA7Q9P0W8 599 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 PCSK1NQ9UHG2 260 aa1.57□□□□□ -2.16
HMGB1P29-201ENST00000505659 U3KQV3 271 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms