RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 ASB18Q6ZVZ8 466 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 SIAH3Q8IW03 269 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 RBMXL3Q8N7X1 1067 aaKnown RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 TMEM99Q8N816 258 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 LSM14AQ8ND56 463 aaKnown RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 SDR9C7Q8NEX9 313 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 ATP6V1C2Q8NEY4 427 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 TSPAN14Q8NG11 270 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 PTP4A1Q93096 173 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 SLC25A36Q96CQ1 311 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 FAM122AQ96E09 287 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 LRR1Q96L50 414 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 KLHL15Q96M94 604 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 ERMAPQ96PL5 475 aaPredicted RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 PIGQQ9BRB3 760 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 ZNF649Q9BS31 505 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 MRPS26Q9BYN8 205 aaKnown RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 SLC6A15Q9H2J7 730 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 MED20Q9H944 212 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 AMBNQ9NP70 447 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 QPCTLQ9NXS2 382 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 KLHL13Q9P2N7 655 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 ERVK-18Q9QC07 812 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 SLC6A5Q9Y345 797 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 CORINQ9Y5Q5 1042 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 IER3IP1Q9Y5U9 82 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 SPIN1Q9Y657 262 aaPredicted RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 ZNF407Q9C0G0 2248 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 CHD8Q9HCK8 2581 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 URB1O60287 2271 aaKnown RBP9.3□□□□□ -0.92
TPM3-217ENST00000504663 OR6C68A6NDL8 312 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 NPIPB13A6NJU9 1138 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 AQP7P3A6NL99 342 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 NPIPB4C9JG80 1138 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 BLOC1S5-TXNDC5H3BN57 136 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 SMAD9O15198 467 aaKnown RBP9.3□□□□□ -0.92
TPM3-217ENST00000504663 PRODHO43272 600 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 FAM20BO75063 409 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 AKR7A3O95154 331 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 HMGN1P05114 100 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 CLUP10909 449 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 HOXB1P14653 301 aaPredicted RBP9.3□□□□□ -0.92
TPM3-217ENST00000504663 FKBP2P26885 142 aaKnown RBP9.3□□□□□ -0.92
TPM3-217ENST00000504663 SDHAP31040 664 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 CDKN2AP42771 156 aaKnown RBP9.3□□□□□ -0.92
TPM3-217ENST00000504663 STARP49675 285 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 DIO1P49895 249 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 CTXN1P60606 82 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 TUBA4AP68366 448 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 RUNX1T1Q06455 604 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.3□□□□□ -0.92
TPM3-217ENST00000504663 ITGADQ13349 1161 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 MFSD13AQ14CX5 517 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 ACKR1Q16570 336 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 TBR1Q16650 682 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 LINC01590Q5TEZ4 76 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 Q6ZS92 163 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 H1FNTQ75WM6 255 aaPredicted RBP9.3□□□□□ -0.92
TPM3-217ENST00000504663 CXXC5Q7LFL8 322 aaKnown RBP9.3□□□□□ -0.92
TPM3-217ENST00000504663 SPARTQ8N0X7 666 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 C10orf53Q8N6V4 93 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 CYB561A3Q8NBI2 242 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 TMEM178AQ8NBL3 297 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 ANKK1Q8NFD2 765 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 OR4K13Q8NH42 304 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 OR14L1PQ8NHC6 308 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 NMD3Q96D46 503 aaKnown RBP9.3□□□□□ -0.92
TPM3-217ENST00000504663 SLC38A2Q96QD8 506 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 OR5B2Q96R09 309 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 TAAR6Q96RI8 345 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.3□□□□□ -0.92
TPM3-217ENST00000504663 ACKR4Q9NPB9 350 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 SERINC1Q9NRX5 453 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 SPRR3Q9UBC9 169 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 ZNF346Q9UL40 294 aaKnown RBP9.3□□□□□ -0.92
TPM3-217ENST00000504663 TRAPPC4Q9Y296 219 aa9.3□□□□□ -0.92
TPM3-217ENST00000504663 A0A087WV48 116 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 TRAV17A0A0B4J275 112 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 LOC102725191A0A1B0GVB3 256 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 MED19A0JLT2 244 aaPredicted RBP9.29□□□□□ -0.92
TPM3-217ENST00000504663 A6NHS1 94 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 CLCA1A8K7I4 914 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 KLRC4-KLRK1H3BQV0 150 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 DCTN6O00399 190 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 TNFSF11O14788 317 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 IDH3BO43837 385 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 PLGP00747 810 aaPredicted RBP9.29□□□□□ -0.92
TPM3-217ENST00000504663 IGHG3P01860 377 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 CDK1P06493 297 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 ADORA3P0DMS8 318 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 TFPIP10646 304 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 ZNF708P17019 499 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 ACVR2AP27037 513 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 C21orf33P30042 268 aaPredicted RBP9.29□□□□□ -0.92
TPM3-217ENST00000504663 AGFG1P52594 562 aaKnown RBP9.29□□□□□ -0.92
TPM3-217ENST00000504663 PPIAP62937 165 aaKnown RBP9.29□□□□□ -0.92
TPM3-217ENST00000504663 PUDPQ08623 228 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 PMS2P3Q13401 168 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 KRR1Q13601 381 aaKnown RBP9.29□□□□□ -0.92
TPM3-217ENST00000504663 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.29□□□□□ -0.922e-19■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms