RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SLCO4A1Q96BD0 722 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 DUS3LQ96G46 650 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 PSMG3-AS1Q96PY0 264 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 RAB3IPQ96QF0 476 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 ALPK1Q96QP1 1244 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 YY1AP1Q9H869 796 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 B3GAT1Q9P2W7 334 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 TMCC3Q9ULS5 477 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 PROCRQ9UNN8 238 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 TMEM5Q9Y2B1 443 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 FLVCR1Q9Y5Y0 555 aa10.57□□□□□ -0.72
PDLIM5-208ENST00000504489 NKX2-6A6NCS4 301 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 EEF1E1-BLOC1S5C9J1V9 151 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 TNFRSF11BO00300 401 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 SIAH2O43255 324 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 EEF1E1O43324 174 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 FKBP6O75344 327 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 SMNDC1O75940 238 aaKnown RBP eCLIP10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 OR6A2O95222 327 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 NQO1P15559 274 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 ZNF43P17038 809 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 MAKP20794 623 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 OMPP47874 163 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 OR3A2P47893 321 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 SLC9A3P48764 834 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 PCYT1AP49585 367 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 PUDPQ08623 228 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 GK3PQ14409 553 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 ANKDD1AQ495B1 522 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 NHLRC1Q6VVB1 395 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 PXKQ7Z7A4 578 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 STK32CQ86UX6 486 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 EPHX4Q8IUS5 362 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 KDM8Q8N371 416 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 LINC00471Q8N535 108 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 ZNF610Q8N9Z0 462 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 OR4K5Q8NGD3 323 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 TMEM45BQ96B21 275 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 LRRC46Q96FV0 321 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 RSRC1Q96IZ7 334 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 C12orf49Q9H741 205 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 PARPBPQ9NWS1 579 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 TAS2R5Q9NYW4 299 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 FOXD3Q9UJU5 478 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 NOSIPQ9Y314 301 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 LYVE1Q9Y5Y7 322 aa10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 UTP20O75691 2785 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-208ENST00000504489 ADGRG4Q8IZF6 3080 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 EFCAB9A8MZ26 197 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 MRPL33O75394 65 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 CNOT4O95628 575 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 CLDN1O95832 211 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 HPRP00739 348 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 CST1P01037 141 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 ADORA3P0DMS8 318 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 UQCRC1P31930 480 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 NTF4P34130 210 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 IFNGR2P38484 337 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 ERFP50548 548 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 ACTR3P61158 418 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 ZNF474Q6S9Z5 364 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 TFAP2EQ6VUC0 442 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 NANOGNBQ7Z5D8 188 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 LUZP2Q86TE4 346 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 UEVLDQ8IX04 471 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 ZNF511Q8NB15 262 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 OR4C15Q8NGM1 316 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 RNASE6Q93091 150 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 ZNF385AQ96PM9 386 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 OPN3Q9H1Y3 402 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 REEP1Q9H902 201 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 KRCC1Q9NPI7 259 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 ARMC1Q9NVT9 282 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 HIF3AQ9Y2N7 669 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 NOX1Q9Y5S8 564 aa10.55□□□□□ -0.72
PDLIM5-208ENST00000504489 BLOC1S5-TXNDC5H3BN57 136 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 KLF4O43474 513 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 TRAF3IP2O43734 574 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 SAGP10523 405 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 HLA-DOBP13765 273 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 AHCYP23526 432 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 GPR4P46093 362 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 RPS4XP62701 263 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 IL1RL1Q01638 556 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 RPL18Q07020 188 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 FHL1Q13642 323 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 C1DQ13901 141 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 KPNB1Q14974 876 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 EXOC3L2Q2M3D2 409 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 C1orf94Q6P1W5 598 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 BEND4Q6ZU67 534 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 AAED1Q7RTV5 226 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 ZER1Q7Z7L7 766 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 OAFQ86UD1 273 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 MEX3DQ86XN8 651 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 C10orf67Q8IYJ2 551 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 ZNF100Q8IYN0 542 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 APH1AQ96BI3 265 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 FAM46AQ96IP4 442 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 RBM24Q9BX46 236 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms