RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 YES1P07947 543 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 HOXB6P17509 224 aaKnown RBP11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 SMSP52788 366 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 RPL18Q07020 188 aaKnown RBP11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 PUDPQ08623 228 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 C1DQ13901 141 aaKnown RBP11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 TMEM201Q5SNT2 666 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 ZNF770Q6IQ21 691 aaPredicted RBP11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 ZFP1Q6P2D0 407 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 CLEC18BQ6UXF7 455 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 CREB3L2Q70SY1 520 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 FAM214BQ7L5A3 538 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 OAFQ86UD1 273 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 SCAIQ8N9R8 606 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 CLEC18CQ8NCF0 446 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 LIPHQ8WWY8 451 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 STARD4Q96DR4 205 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 EMC6Q9BV81 110 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 OPN3Q9H1Y3 402 aaPredicted RBP11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 BCO1Q9HAY6 547 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 MCCC2Q9HCC0 563 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 COQ3Q9NZJ6 369 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 IL20RAQ9UHF4 553 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 TMEM5Q9Y2B1 443 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 EMC9Q9Y3B6 208 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 FLVCR1Q9Y5Y0 555 aa11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 INTS1Q8N201 2190 aaKnown RBP11.78□□□□□ -0.52
PDLIM7-212ENST00000504380 IGKV3D-15A0A087WSY6 115 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 SAC3D1A6NKF1 404 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 ZNF724A8MTY0 619 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 PTP4A3O75365 173 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 IGHV3-9P01782 118 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 IGFBP1P08833 259 aaPredicted RBP11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 ZNF43P17038 809 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 CHRNB4P30926 498 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 UQCRC1P31930 480 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 GSSP48637 474 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 SLC16A1P53985 500 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 CLDN17P56750 224 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 ELF3P78545 371 aaPredicted RBP11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 POU3F1Q03052 451 aaPredicted RBP11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 LGALS3BPQ08380 585 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 MELKQ14680 651 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 PDK3Q15120 406 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 ZBED5Q49AG3 693 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 C1orf94Q6P1W5 598 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 MTFR2Q6P444 385 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 NHLRC1Q6VVB1 395 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 LUZP2Q86TE4 346 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 UEVLDQ8IX04 471 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 ZNF610Q8N9Z0 462 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 ICA1LQ8NDH6 482 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 ADPRHL1Q8NDY3 354 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 OR5K1Q8NHB7 308 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 STMN2Q93045 179 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 ZFP3Q96NJ6 502 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 FEVQ99581 238 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 NIPSNAP1Q9BPW8 284 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 SF3B5Q9BWJ5 86 aaKnown RBP11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 SFXN3Q9BWM7 321 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 KRCC1Q9NPI7 259 aaPredicted RBP11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 GLRX2Q9NS18 164 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 MED29Q9NX70 200 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 PRSS50Q9UI38 385 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 NOSIPQ9Y314 301 aaKnown RBP11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 NOTCH2Q04721 2471 aa11.77□□□□□ -0.53
PDLIM7-212ENST00000504380 USP9YO00507 2555 aaPredicted RBP11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 EEF1E1-BLOC1S5C9J1V9 151 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 EEF1E1O43324 174 aaKnown RBP11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 TRAF3IP2O43734 574 aaPredicted RBP11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 RRP9O43818 475 aaKnown RBP11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 CGAP01215 116 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 CRHP06850 196 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 TSPAN19P0C672 248 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 FCGR1AP12314 374 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 IFNGR1P15260 489 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 ZNF23P17027 643 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 FPR3P25089 353 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 OPRM1P35372 400 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 IFNGR2P38484 337 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 SELENOPP49908 381 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 FXYD6P3P58550 94 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 ZP4Q12836 540 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 TSPAN31Q12999 210 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 CARD17Q5XLA6 110 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 NIPAL3Q6P499 406 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 SHQ1Q6PI26 577 aaKnown RBP11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 CASP12Q6UXS9 341 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 THSD4Q6ZMP0 1018 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 AAED1Q7RTV5 226 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 GALNT5Q7Z7M9 940 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 KIF18BQ86Y91 864 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 FAM26EQ8N5C1 309 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 LRRC75AQ8NAA5 344 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 OR6K3Q8NGY3 331 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 ASB5Q8WWX0 329 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 CENPNQ96H22 339 aaPredicted RBP11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 BDH2Q9BUT1 245 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 EGLN3Q9H6Z9 239 aa11.76□□□□□ -0.53
PDLIM7-212ENST00000504380 SMURF2Q9HAU4 748 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms