RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 E2F1Q01094 437 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 OR6K6Q8NGW6 343 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 SLC25A36Q96CQ1 311 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 DNAJA3Q96EY1 480 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 OR11A1Q9GZK7 315 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 KLRF1Q9NZS2 232 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 SHISA3A0PJX4 238 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 FTCDNL1E5RQL4 147 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 UPK1BO75841 260 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 OCM2P0CE71 109 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 OCMP0CE72 109 aaPredicted RBP19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 MSX1P28360 303 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 GRPRP30550 384 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 PYCR1P32322 319 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 APOBEC1P41238 236 aaKnown RBP19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 DMKNQ6E0U4 476 aaPredicted RBP19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 LYPD4Q6UWN0 246 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 ARSKQ6UWY0 536 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 SPACA9Q96E40 222 aaPredicted RBP19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 WDFY2Q96P53 400 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 TSSK2Q96PF2 358 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 ST6GALNAC2Q9UJ37 374 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 COPS3Q9UNS2 423 aa19.3■□□□□ 0.68
UBE2D3-216ENST00000503742 SLC35F4A4IF30 521 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 OR2T1O43869 369 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 AHSA1O95433 338 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 ATP1A4Q13733 1029 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 TRAM1Q15629 374 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 EXT1Q16394 746 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 SPANXN2Q5MJ10 180 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 ARL9Q6T311 187 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 NEIL3Q8TAT5 605 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 PGLYRP3Q96LB9 341 aa19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 AKAP7Q9P0M2 348 aaPredicted RBP19.29■□□□□ 0.68
UBE2D3-216ENST00000503742 DCTN6O00399 190 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 CELA2AP08217 269 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 HSF2Q03933 536 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 OXA1LQ15070 435 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 TP53I3Q53FA7 332 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 SNRNP27Q8WVK2 155 aaKnown RBP19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 ASB15Q8WXK1 588 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 PELI1Q96FA3 418 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 SLC30A2Q9BRI3 323 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 KCNN2Q9H2S1 579 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 INIPQ9NRY2 104 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 PPP4R1LQ9P1A2 415 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 NCDNQ9UBB6 729 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 LOXL2Q9Y4K0 774 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 WIF1Q9Y5W5 379 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 FAM171A2A8MVW0 826 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 C11orf98E9PRG8 122 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 DVL2O14641 736 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 OGG1O15527 345 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 CD59P13987 128 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 SLC25A53Q5H9E4 307 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 DCAF12Q5T6F0 453 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 RPTNQ6XPR3 784 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 M1APQ8TC57 530 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 TTTY10Q9BZA0 68 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 METTL7AQ9H8H3 244 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 SDHAF3Q9NRP4 125 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 MRPL39Q9NYK5 338 aaKnown RBP19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 UGT2A1Q9Y4X1 527 aa19.28■□□□□ 0.68
UBE2D3-216ENST00000503742 A0A1W2PQ72 361 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 H7C1C5 153 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 PLPP3O14495 311 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 CDX4O14627 284 aaPredicted RBP19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 CASKO14936 926 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 MAGEB4O15481 346 aaPredicted RBP19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 SC5DO75845 299 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 RENP00797 406 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 F8A1P23610 371 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 CASP3P42574 277 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 LCN6P62502 163 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 ZNF181Q2M3W8 571 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 OR6V1Q8N148 313 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 ZNF511Q8NB15 262 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 OR2T4Q8NH00 348 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 CEP19Q96LK0 163 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 GRIP1Q9Y3R0 1128 aa19.27■□□□□ 0.68
UBE2D3-216ENST00000503742 GPR179Q6PRD1 2367 aa19.27■□□□□ 0.67
UBE2D3-216ENST00000503742 RGS5O15539 181 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 ZNF208O43345 1280 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 STK17BO94768 372 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 IGHMP01871 453 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 SLC3A1Q07837 685 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 FOXF1Q12946 379 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 EEF1A1P5Q5VTE0 462 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 SLC6A19Q695T7 634 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 SLC16A9Q7RTY1 509 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 LYSMD2Q8IV50 215 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 LAX1Q8IWV1 398 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 TIGD4Q8IY51 512 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 ZNF417Q8TAU3 575 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 ZNF519Q8TB69 540 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 SNX18Q96RF0 628 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 ZNF587Q96SQ5 575 aaPredicted RBP19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 SRA1Q9HD15 236 aaKnown RBP19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 DAPK2Q9UIK4 370 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 VDAC3Q9Y277 283 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms