RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 NPIPB7O75200 414 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 SLC43A1O75387 559 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 G6PDP11413 515 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 RPS4Y1P22090 263 aaKnown RBP13.32□□□□□ -0.28
HDAC6-236ENST00000498808 IL13RA1P78552 427 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 HPCAP84074 193 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 GSTA3Q16772 222 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 C1orf140Q5VVS0 124 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 RBMS3Q6XE24 437 aaKnown RBP13.32□□□□□ -0.28
HDAC6-236ENST00000498808 ZCCHC23Q6ZST2 131 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 GSPT2Q8IYD1 628 aaKnown RBP13.32□□□□□ -0.28
HDAC6-236ENST00000498808 GPR137CQ8N3F9 429 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 ANKFN1Q8N957 763 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 B3GAT1Q9P2W7 334 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 SEC14L4Q9UDX3 406 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 DUSP13Q9UII6 198 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 NOX1Q9Y5S8 564 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 A0A1W2PPW3 197 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 ZNF99A8MXY4 864 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-236ENST00000498808 FTCDNL1E5RQL4 147 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 HMGN4O00479 90 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 GKN3PP0CG01 181 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 PNMTP11086 282 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 UQCRBP14927 111 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 UQCRC2P22695 453 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 GATA3P23771 443 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 CRHR1P34998 444 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 SYPL1Q16563 259 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 GSG1Q2KHT4 349 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 TRMT5Q32P41 509 aaKnown RBP13.31□□□□□ -0.28
HDAC6-236ENST00000498808 ALKBH6Q3KRA9 238 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 PHYHD1Q5SRE7 291 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 ANKRD46Q86W74 232 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 AGR3Q8TD06 166 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 ZMAT3Q9HA38 289 aaKnown RBP13.31□□□□□ -0.28
HDAC6-236ENST00000498808 RLIMQ9NVW2 624 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 ZNF346Q9UL40 294 aaKnown RBP13.31□□□□□ -0.28
HDAC6-236ENST00000498808 WIPI2Q9Y4P8 454 aa13.31□□□□□ -0.28
HDAC6-236ENST00000498808 TRIM13O60858 407 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 RNASE1P07998 156 aaKnown RBP13.3□□□□□ -0.28
HDAC6-236ENST00000498808 TFPTP0C1Z6 253 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 CD79AP11912 226 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 ZNF43P17038 809 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 ACAA2P42765 397 aaKnown RBP13.3□□□□□ -0.28
HDAC6-236ENST00000498808 CCT5P48643 541 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 CLDN8P56748 225 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 RPS23P62266 143 aaKnown RBP13.3□□□□□ -0.28
HDAC6-236ENST00000498808 CCL8P80075 99 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 CKAP4Q07065 602 aaKnown RBP13.3□□□□□ -0.28
HDAC6-236ENST00000498808 PIGFQ07326 219 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 GLIPR1L2Q4G1C9 344 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 GKAP1Q5VSY0 366 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-236ENST00000498808 TMEM123Q8N131 208 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 NOA1Q8NC60 698 aaKnown RBP13.3□□□□□ -0.28
HDAC6-236ENST00000498808 NEURL3Q96EH8 262 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 ZNF48Q96MX3 618 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-236ENST00000498808 TRNT1Q96Q11 434 aaKnown RBP13.3□□□□□ -0.28
HDAC6-236ENST00000498808 OR2M2Q96R28 347 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 PTDSS2Q9BVG9 487 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 ZNF224Q9NZL3 707 aa13.3□□□□□ -0.28
HDAC6-236ENST00000498808 C17orf100A8MU93 164 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 CPSF4O95639 269 aaKnown RBP13.29□□□□□ -0.28
HDAC6-236ENST00000498808 IL7RP16871 459 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 MDKP21741 143 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-236ENST00000498808 CRYBB2P43320 205 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 WBP2NLQ6ICG8 309 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 TRMT10CQ7L0Y3 403 aaKnown RBP13.29□□□□□ -0.28
HDAC6-236ENST00000498808 HOMEZQ8IX15 550 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 BCL6BQ8N143 479 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-236ENST00000498808 CADM2Q8N3J6 435 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 SYT14Q8NB59 555 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 PIK3C3Q8NEB9 887 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 OR8J2Q8NGG1 315 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 MFSD8Q8NHS3 518 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 SLC25A36Q96CQ1 311 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 TSPAN32Q96QS1 320 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 ZNF69Q9UC07 566 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 MARCOQ9UEW3 520 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-236ENST00000498808 CACNG2Q9Y698 323 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 DSPPQ9NZW4 1301 aa13.29□□□□□ -0.28
HDAC6-236ENST00000498808 M0R3G1 203 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 AHSA1O95433 338 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 CLPTM1O96005 669 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 GCH1P30793 250 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 GIPRP48546 466 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
HDAC6-236ENST00000498808 LCN2P80188 198 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 GALK2Q01415 458 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 BAMBIQ13145 260 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 GNA13Q14344 377 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 CHI3L2Q15782 390 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 NKPD1Q17RQ9 610 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 LEG1Q6P5S2 330 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 LRRC74BQ6ZQY2 392 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 ZNF440Q8IYI8 595 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 CNPY4Q8N129 248 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 STK35Q8TDR2 534 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 OXGR1Q96P68 337 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 PKP2Q99959 881 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms