RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 NSL1Q96IY1 281 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 CDRT15Q96T59 188 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 ZNF426Q9BUY5 554 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 FNDC11Q9BVV2 318 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 LINC00470Q9BZP3 86 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 AMBRA1Q9C0C7 1298 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 FKRPQ9H9S5 495 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 UBTD1Q9HAC8 227 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 ZNF229Q9UJW7 825 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 RCE1Q9Y256 329 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 MED31Q9Y3C7 131 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 NOX1Q9Y5S8 564 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 APCP25054 2843 aa11.26□□□□□ -0.61
HSPG2-213ENST00000498495 A0A1W2PR80 420 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 C11orf98E9PRG8 122 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 SERPINI2O75830 405 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 ZNF432O94892 652 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 HPRP00739 348 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 PLAUP00749 431 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 HLA-DOBP13765 273 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 FUT1P19526 365 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 TCN1P20061 433 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-213ENST00000498495 HOXC12P31275 282 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 POU3F1Q03052 451 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-213ENST00000498495 SAMD4BQ5PRF9 694 aaKnown RBP11.25□□□□□ -0.61
HSPG2-213ENST00000498495 ZNF704Q6ZNC4 412 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-213ENST00000498495 DEFB107AQ8IZN7 70 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 GPR137CQ8N3F9 429 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 LRRC17Q8N6Y2 441 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 PIK3C3Q8NEB9 887 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 C1orf162Q8NEQ5 155 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-213ENST00000498495 TMEM255BQ8WV15 326 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 GEMIN6Q8WXD5 167 aaKnown RBP11.25□□□□□ -0.61
HSPG2-213ENST00000498495 SGTBQ96EQ0 304 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 TXNDC15Q96J42 360 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 HSH2DQ96JZ2 352 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 EMC6Q9BV81 110 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 MEPEQ9NQ76 525 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-213ENST00000498495 A4GNTQ9UNA3 340 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 SNX13Q9Y5W8 968 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 SLC25A15Q9Y619 301 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 DCHS2Q6V1P9 2916 aa11.25□□□□□ -0.61
HSPG2-213ENST00000498495 ANKHD1Q8IWZ3 2542 aaKnown RBP11.24□□□□□ -0.61
HSPG2-213ENST00000498495 SLC35F4A4IF30 521 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 DPRXA6NFQ7 191 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 B2RBV5 119 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 BLOC1S5-TXNDC5H3BN57 136 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 CLOCKO15516 846 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 RNF13O43567 381 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 TRAF3IP2O43734 574 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-213ENST00000498495 ATE1O95260 518 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 ASAH2BP0C7U1 165 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 UGT2B15P54855 530 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 PRPS1P60891 318 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 ROR2Q01974 943 aaKnown RBP11.24□□□□□ -0.61
HSPG2-213ENST00000498495 LGALS3BPQ08380 585 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 ZP4Q12836 540 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 CARD17Q5XLA6 110 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 KLHL17Q6TDP4 642 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 KLHL24Q6TFL4 600 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 C17orf78Q8N4C9 275 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 FAM156AQ8NDB6 213 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 PFN4Q8NHR9 129 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 PIGTQ969N2 578 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 ALKBH3Q96Q83 286 aaPredicted RBP11.24□□□□□ -0.61
HSPG2-213ENST00000498495 FOXC2Q99958 501 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 C1QTNF6Q9BXI9 259 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 GORASP2Q9H8Y8 452 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 SLC17A5Q9NRA2 495 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 DCAF13Q9NV06 445 aaKnown RBP11.24□□□□□ -0.61
HSPG2-213ENST00000498495 MED29Q9NX70 200 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 TAS2R5Q9NYW4 299 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 RHCGQ9UBD6 479 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 SAMD4AQ9UPU9 718 aaKnown RBP11.24□□□□□ -0.61
HSPG2-213ENST00000498495 AMDHD2Q9Y303 409 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 FAM32AQ9Y421 112 aaKnown RBP11.24□□□□□ -0.61
HSPG2-213ENST00000498495 RNF115Q9Y4L5 304 aa11.24□□□□□ -0.61
HSPG2-213ENST00000498495 HTR3EA5X5Y0 456 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 RPL36A-HNRNPH2H7BZ11 118 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 J3KTA2 159 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 M0R3G1 203 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 WNT11O96014 354 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 IGF2P01344 180 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 HSD17B1P14061 328 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 IFNGR1P15260 489 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 CD53P19397 219 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 MSX2P35548 267 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-213ENST00000498495 ZNF83P51522 516 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 BSPH1Q075Z2 132 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 CAMK2DQ13557 499 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 TRAM2Q15035 370 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 DEFB113Q30KQ7 82 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 C1QTNF12Q5T7M4 302 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 TMEM108Q6UXF1 575 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 C20orf204Q6ZNR8 217 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 LINGO2Q7L985 606 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 RRM2BQ7LG56 351 aa11.23□□□□□ -0.61
HSPG2-213ENST00000498495 SLC46A3Q7Z3Q1 461 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms