RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SNX33Q8WV41 574 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 SLC25A36Q96CQ1 311 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 TUBGCP3Q96CW5 907 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 ZNF385DQ9H6B1 395 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 MED29Q9NX70 200 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 MARCOQ9UEW3 520 aaPredicted RBP9.99□□□□□ -0.81
CDK9-205ENST00000498339 ZNF346Q9UL40 294 aaKnown RBP9.99□□□□□ -0.81
CDK9-205ENST00000498339 RCE1Q9Y256 329 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 SMIM23A6NLE4 172 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 ZNF99A8MXY4 864 aaPredicted RBP9.98□□□□□ -0.81
CDK9-205ENST00000498339 TMEM229AB2RXF0 380 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 CLDN25C9JDP6 229 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 M0R3G1 203 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 RNASET2O00584 256 aaKnown RBP9.98□□□□□ -0.81
CDK9-205ENST00000498339 TRIM13O60858 407 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 RP2O75695 350 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 RAB36O95755 333 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 GKN3PP0CG01 181 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 PNMTP11086 282 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 NCF2P19878 526 aaPredicted RBP9.98□□□□□ -0.81
CDK9-205ENST00000498339 PRTN3P24158 256 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 GLRXP35754 106 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 PTDSS1P48651 473 aaKnown RBP9.98□□□□□ -0.81
CDK9-205ENST00000498339 P2RY4P51582 365 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 IL13RA1P78552 427 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 CCL8P80075 99 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 MRPS11P82912 194 aaKnown RBP9.98□□□□□ -0.81
CDK9-205ENST00000498339 PCLAFQ15004 111 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 GSTA3Q16772 222 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 XKR7Q5GH72 579 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 CARD17Q5XLA6 110 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 TMEM154Q6P9G4 183 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 TRMT10CQ7L0Y3 403 aaKnown RBP9.98□□□□□ -0.81
CDK9-205ENST00000498339 RIMKLAQ8IXN7 391 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 CCDC36Q8IYA8 594 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 CNPY4Q8N129 248 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 PIK3C3Q8NEB9 887 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 ZNF837Q96EG3 531 aaPredicted RBP9.98□□□□□ -0.81
CDK9-205ENST00000498339 GAL3ST1Q99999 423 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 SLC35A5Q9BS91 424 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 ZMAT3Q9HA38 289 aaKnown RBP9.98□□□□□ -0.81
CDK9-205ENST00000498339 GPR160Q9UJ42 338 aa9.98□□□□□ -0.81
CDK9-205ENST00000498339 ISPDA4D126 451 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 AGAP5A6NIR3 686 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 RPL36A-HNRNPH2H7BZ11 118 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 FAAHO00519 579 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 IGHV2-5P01817 119 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 DBIP07108 87 aaKnown RBP9.97□□□□□ -0.81
CDK9-205ENST00000498339 TFPTP0C1Z6 253 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 GATA3P23771 443 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 CRHR1P34998 444 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 SELENOVP59797 346 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 LCN2P80188 198 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 TEKQ02763 1124 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 BAMBIQ13145 260 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 MAD2L1Q13257 205 aaPredicted RBP9.97□□□□□ -0.81
CDK9-205ENST00000498339 CHI3L2Q15782 390 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 SYPL1Q16563 259 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 UGT3A2Q3SY77 523 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 SAXO2Q658L1 398 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 WBP2NLQ6ICG8 309 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 ZNF440Q8IYI8 595 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 C4orf33Q8N1A6 199 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 ANKFN1Q8N957 763 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 ANKK1Q8NFD2 765 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 TIMD4Q96H15 378 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 C3orf30Q96M34 536 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 OR51B6Q9H340 312 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 RLIMQ9NVW2 624 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 NOP53Q9NZM5 478 aaKnown RBP9.97□□□□□ -0.81
CDK9-205ENST00000498339 TAAR3PQ9P1P4 343 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 SLC7A8Q9UHI5 535 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 VWFP04275 2813 aa9.97□□□□□ -0.81
CDK9-205ENST00000498339 TANC2Q9HCD6 1990 aa9.96□□□□□ -0.81
CDK9-205ENST00000498339 A0A096LPI6 279 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 IGHV1-69-2A0A0G2JMI3 117 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 PRAMEF27A3QJZ7 478 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 POM121CA8CG34 1229 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 HMGN4O00479 90 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 NPHS1O60500 1241 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 FGF4P08620 206 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 NR2F1P10589 423 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 B4GALT1P15291 398 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 ZNF14P17017 642 aaPredicted RBP9.96□□□□□ -0.82
CDK9-205ENST00000498339 KRT4P19013 534 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 RPS5P46782 204 aaKnown RBP9.96□□□□□ -0.82
CDK9-205ENST00000498339 ANXA11P50995 505 aaKnown RBP9.96□□□□□ -0.82
CDK9-205ENST00000498339 CLDN8P56748 225 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 LIN52Q52LA3 116 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 AP1ARQ63HQ0 302 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 RGS7BPQ6MZT1 257 aaPredicted RBP9.96□□□□□ -0.82
CDK9-205ENST00000498339 ZNF813Q6ZN06 617 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 RETREG3Q86VR2 466 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 RNF130Q86XS8 419 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 PEX5LQ8IYB4 626 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 C17orf53Q8N3J3 647 aaPredicted RBP9.96□□□□□ -0.82
CDK9-205ENST00000498339 NOA1Q8NC60 698 aaKnown RBP9.96□□□□□ -0.82
CDK9-205ENST00000498339 ICA1LQ8NDH6 482 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 VPS37AQ8NEZ2 397 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 SLC25A28Q96A46 364 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms