RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 MRTO4Q9UKD2 239 aaKnown RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 FARSAQ9Y285 508 aaKnown RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 NTNG1Q9Y2I2 539 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 PCDHGB5Q9Y5G0 923 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 FRYLO94915 3013 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 A0A0B4J2E0 115 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 LOC101059948A0A1B0GTJ6 334 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 A0A1B0GX12 115 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 TRAPPC13A5PLN9 417 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 TRIM64A6NGJ6 449 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 CPSF4LA6NMK7 179 aaKnown RBP4.83□□□□□ -1.64
GGPS1-208ENST00000497327 B4DXG7 233 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 AP3D1O14617 1153 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 HS6ST1O60243 411 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ICOSLGO75144 302 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 REM1O75628 298 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 CLIC3O95833 236 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 HPP00738 406 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ADAP00813 363 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 GKN3PP0CG01 181 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 IGFBP5P24593 272 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 CD82P27701 267 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 EPHA2P29317 976 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 CCKARP32238 428 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 PTGDSP41222 190 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 OMPP47874 163 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 RFX3P48380 749 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 DIO1P49895 249 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 RAD23AP54725 363 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 GAS1P54826 345 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 DLX5P56178 289 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 TAS2R41P59536 307 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ISL1P61371 349 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 RPS18P62269 152 aaKnown RBP4.83□□□□□ -1.64
GGPS1-208ENST00000497327 PLCXD2Q0VAA5 305 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 Q0VFX4 171 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ST3GAL3Q11203 375 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 CHAF1BQ13112 559 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 SKP2Q13309 424 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 DNASE1L3Q13609 305 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 TRAM2Q15035 370 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 PDK3Q15120 406 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 OR1Q1Q15612 314 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 EXT1Q16394 746 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 NDUFAF6Q330K2 333 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF791Q3KP31 576 aaPredicted RBP4.83□□□□□ -1.64
GGPS1-208ENST00000497327 DCST1Q5T197 706 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 LAIR2Q6ISS4 152 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 H3F3CQ6NXT2 135 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 C1orf94Q6P1W5 598 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 PGBD2Q6P3X8 592 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF613Q6PF04 617 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 CBLN3Q6UW01 205 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 WDR88Q6ZMY6 472 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 PTCHD4Q6ZW05 846 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 NDUFAF7Q7L592 441 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF550Q7Z398 422 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 NUP54Q7Z3B4 507 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 RANBP3LQ86VV4 465 aaPredicted RBP4.83□□□□□ -1.64
GGPS1-208ENST00000497327 CCDC71Q8IV32 467 aaPredicted RBP4.83□□□□□ -1.64
GGPS1-208ENST00000497327 LIX1LQ8IVB5 337 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 NKAIN4Q8IVV8 208 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF440Q8IYI8 595 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 PRR22Q8IZ63 422 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 LINC00471Q8N535 108 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ATG16L2Q8NAA4 619 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 OR4K5Q8NGD3 323 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 OR9Q2Q8NGE9 314 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 OSR1Q8TAX0 266 aaPredicted RBP4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ADAMTS16Q8TE57 1224 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 GRHL3Q8TE85 626 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ACOT11Q8WXI4 607 aaPredicted RBP4.83□□□□□ -1.64
GGPS1-208ENST00000497327 SDCCAG3Q96C92 435 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 SLC41A3Q96GZ6 507 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 NODALQ96S42 347 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 GPA33Q99795 319 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 NIPSNAP1Q9BPW8 284 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 KLHDC3Q9BQ90 382 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF559Q9BR84 538 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 LAT2Q9GZY6 243 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 Q9H521 79 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ARMC7Q9H6L4 198 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 SH2D2AQ9NP31 389 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 SLC13A4Q9UKG4 626 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 TMCC3Q9ULS5 477 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 ICAM5Q9UMF0 924 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 MGAT4BQ9UQ53 548 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 SLC35A3Q9Y2D2 325 aa4.83□□□□□ -1.64
GGPS1-208ENST00000497327 IGLV3-32A0A0A0MS00 114 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 NSG1A0A0A6YYJ2 146 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 LOC100130705A0A1B0GUX0 176 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 A0A1B0GWA3 101 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 FAM90A10PA6NDY2 464 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 C17orf51A8MQB3 221 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 STMND1H3BQB6 276 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 WWP2O00308 870 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF264O43296 627 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 SPRY2O43597 315 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 EIF4E2O60573 245 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 OR2J2O76002 312 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms