RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TMED9Q9BVK6 235 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 DEFB126Q9BYW3 111 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 PTGES2Q9H7Z7 377 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 METTL7AQ9H8H3 244 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 SP140LQ9H930 580 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 MED20Q9H944 212 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 MMP25Q9NPA2 562 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 NRIP3Q9NQ35 241 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 KLHL1Q9NR64 748 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 RXFP3Q9NSD7 469 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 FAM86C1Q9NVL1 165 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 ETAA1Q9NY74 926 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 PPP4R1LQ9P1A2 415 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 UGT2A1Q9Y4X1 527 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 PCDHGA5Q9Y5G8 931 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 CORINQ9Y5Q5 1042 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 COL27A1Q8IZC6 1860 aaPredicted RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 GVINP1Q7Z2Y8 2422 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 TMED7-TICAM2A0A0A6YYA0 188 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 LY6G6EA0A0G2JKS1 128 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 TEX13CA0A0J9YWL9 993 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 A6NIZ1 184 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ZNF879B4DU55 563 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 J3QLW9 94 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 PDCD5O14737 125 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 TBX1O43435 398 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 HYAL3O43820 417 aaPredicted RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 GPRIN2O60269 458 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 SUSD5O60279 629 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 TMEM127O75204 238 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 RFPL3O75679 317 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ZNF432O94892 652 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 SNX4O95219 450 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 NTN1O95631 604 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 TXNDC12O95881 172 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 PTTG1O95997 202 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 KRT8P05787 483 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 CD1AP06126 327 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 NR2C1P13056 603 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ZNF19P17023 458 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 CD33P20138 364 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 SLC2A5P22732 501 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ACP1P24666 158 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 PTBP1P26599 531 aaKnown RBP eCLIP6.29□□□□□ -1.4
USP39-219ENST00000496047 TGFBR1P36897 503 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 MPLP40238 635 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 APOBEC1P41238 236 aaKnown RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 MAP2K3P46734 347 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 RPS5P46782 204 aaKnown RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 MTNR1BP49286 362 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 DAP3P51398 398 aaKnown RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 RAP1BP61224 184 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 RAP1AP62834 184 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ERVK-25P63136 954 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 MC2RQ01718 297 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 MXD1Q05195 221 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 SGCBQ16585 318 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 COL28A1Q2UY09 1125 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 TBC1D25Q3MII6 688 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 CCDC58Q4VC31 144 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 FCRLBQ6BAA4 426 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 POMZP3Q6PJE2 187 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 CD200R1LQ6Q8B3 271 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ARL9Q6T311 187 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 OPN5Q6U736 354 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 METAP1DQ6UB28 335 aaPredicted RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 Q6ZNX1 250 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 DCDC5Q6ZRR9 648 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ZNF554Q86TJ5 538 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 TPRA1Q86W33 373 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 MFSD4AQ8N468 514 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 TMEM99Q8N816 258 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 POC5Q8NA72 575 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 CYB561A3Q8NBI2 242 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 OR5J2Q8NH18 312 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 SETD6Q8TBK2 473 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 PHYHIPQ92561 330 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 PHF3Q92576 2039 aaKnown RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 KISS1RQ969F8 398 aaPredicted RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 TMEM203Q969S6 136 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 LMF1Q96S06 567 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 CDADC1Q9BWV3 514 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 NRSN2Q9GZP1 204 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ADAM19Q9H013 955 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 COMMD4Q9H0A8 199 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 SLITRK2Q9H156 845 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 RERGLQ9H628 205 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ADGRL4Q9HBW9 690 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 CPNE5Q9HCH3 593 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 ABCB10Q9NRK6 738 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 INIPQ9NRY2 104 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 RALYQ9UKM9 306 aaKnown RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 PPIEQ9UNP9 301 aaKnown RBP6.29□□□□□ -1.4
USP39-219ENST00000496047 TMED7Q9Y3B3 224 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 U3KQA8 63 aa6.29□□□□□ -1.4
USP39-219ENST00000496047 USP24Q9UPU5 2620 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 IGKV1D-42A0A075B6H8 117 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 ARPC4-TTLL3A0A0A6YYG9 625 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 B4E171 279 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms