RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 RBBP8Q99708 897 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 PIGQQ9BRB3 760 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 TBCDQ9BTW9 1192 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 DOHHQ9BU89 302 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 UGT2B28Q9BY64 529 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 OR2B2Q9GZK3 357 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 CXorf21Q9HAI6 301 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 YAE1D1Q9NRH1 226 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 TEX10Q9NXF1 929 aaPredicted RBP3.76□□□□□ -1.81
VPS52-222ENST00000495981 NUDT4Q9NZJ9 180 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 ZNF629Q9UEG4 869 aaPredicted RBP3.76□□□□□ -1.81
VPS52-222ENST00000495981 MTRF1LQ9UGC7 380 aaKnown RBP3.76□□□□□ -1.81
VPS52-222ENST00000495981 IL19Q9UHD0 177 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 PTBP2Q9UKA9 531 aaKnown RBP3.76□□□□□ -1.81
VPS52-222ENST00000495981 BLOC1S6Q9UL45 172 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 SNX12Q9UMY4 172 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 JRKLQ9Y4A0 524 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 ASB4Q9Y574 426 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 WIF1Q9Y5W5 379 aa3.76□□□□□ -1.81
VPS52-222ENST00000495981 TCRBV9S1A1TA0A576 114 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 C5orf51A6NDU8 294 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 TUBAL3A6NHL2 446 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 ANKDD1BA6NHY2 528 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 FAM159BA6NKW6 160 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 WASHC1A8K0Z3 465 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 C17orf51A8MQB3 221 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 UBXN8O00124 270 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 ANKRD28O15084 1053 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 ARHGEF9O43307 516 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 ZIC3O60481 467 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 SMPD2O60906 423 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 STK16O75716 305 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 ACSL3O95573 720 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 RLN1P04808 185 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 RHOXF2BP0C7M4 288 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 FAM157CP0CG43 387 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PTH2RP49190 550 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 CASP9P55211 416 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 CLDN18P56856 261 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 CLDN20P56880 219 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 RPS13P62277 151 aaKnown RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 IRF8Q02556 426 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 TGM3Q08188 693 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 FUT7Q11130 342 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PNRC1Q12796 327 aaPredicted RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 CHIT1Q13231 466 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 GUSBP1Q15486 140 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 NNATQ16517 81 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 FAM174BQ3ZCQ3 159 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 AARDQ4LEZ3 155 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 EIPR1Q53HC9 387 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PAGE2BQ5JRK9 111 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PAPPA-AS1Q5QFB9 102 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 SLC22A10Q63ZE4 541 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 OR52E8Q6IFG1 317 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 SULT1C3Q6IMI6 304 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 MED27Q6P2C8 311 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 DEF8Q6ZN54 512 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 SLC16A12Q6ZSM3 486 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 Q6ZSV7 163 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 Q75L30 129 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 CMC1Q7Z7K0 106 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 LRRC8AQ8IWT6 810 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PM20D2Q8IYS1 436 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PRR22Q8IZ63 422 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 CENPLQ8N0S6 344 aaPredicted RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 GCNT2Q8N0V5 402 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PDIK1LQ8N165 341 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 LRRC75A-AS1Q8N1F1 130 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 SLC35F6Q8N357 371 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 GCSAMQ8N6F7 178 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 SNX31Q8N9S9 440 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 FBXO36Q8NEA4 188 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 FAM83FQ8NEG4 500 aaPredicted RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 C17orf47Q8NEP4 570 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 LRRC8CQ8TDW0 803 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 HGDQ93099 445 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 UCN3Q969E3 161 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 ITFG2Q969R8 447 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PPWD1Q96BP3 646 aaKnown RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 ZNF582Q96NG8 517 aaPredicted RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 SECISBP2Q96T21 854 aaKnown RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 NAP1L3Q99457 506 aaPredicted RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 TUBA1CQ9BQE3 449 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PELOQ9BRX2 385 aaKnown RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 DUSP26Q9BV47 211 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 SFXN3Q9BWM7 321 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 ANGPTL4Q9BY76 406 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 ROGDIQ9GZN7 287 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 TSPYL1Q9H0U9 437 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 NXF5Q9H1B4 397 aaKnown RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 OR51B5Q9H339 312 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 SLA2Q9H6Q3 261 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 EXO5Q9H790 373 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 RPF2Q9H7B2 306 aaKnown RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 DDX31Q9H8H2 851 aaKnown RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 Q9N2K0 584 aa3.75□□□□□ -1.81
VPS52-222ENST00000495981 PPANQ9NQ55 473 aaKnown RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 RCC2Q9P258 522 aaKnown RBP3.75□□□□□ -1.81
VPS52-222ENST00000495981 PHF11Q9UIL8 331 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms