RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 BBOF1Q8ND07 529 aa3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 RNF139Q8WU17 664 aa3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 NDRG1Q92597 394 aaKnown RBP3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 TUBGCP3Q96CW5 907 aa3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 PAGE5Q96GU1 130 aa3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 CAPS2Q9BXY5 557 aa3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 RAB34Q9BZG1 259 aa3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 STMN4Q9H169 189 aaPredicted RBP3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 C20orf85Q9H1P6 137 aa3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 LRRN3Q9H3W5 708 aa3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 SMPD3Q9NY59 655 aaPredicted RBP3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 SNX6Q9UNH7 406 aa3.05□□□□□ -1.92
NCKAP1-208ENST00000495619 PTCH1Q13635 1447 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 PLEKHH1Q9ULM0 1364 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 A6NIZ1 184 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 SPAG6O75602 509 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 RHOBTB1O94844 696 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 SMC2O95347 1197 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 YEATS4O95619 227 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 TPM1P09493 284 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 CHTF8P0CG12 524 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 RBMY1CP0DJD4 496 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 NPR2P20594 1047 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 GDI1P31150 447 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 DDOSTP39656 456 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 KLK7P49862 253 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 ZNF136P52737 540 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 RAP1BP61224 184 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 CTAG1AP78358 180 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 TIGD3Q6B0B8 471 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 OR52W1Q6IF63 320 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 NLRP9Q7RTR0 991 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 CCDC50Q8IVM0 306 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 RDH10Q8IZV5 341 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 KRT222Q8N1A0 295 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 STEAP2Q8NFT2 490 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 OR10G3Q8NGC4 313 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 FANK1Q8TC84 345 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 NRBF2Q96F24 287 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 TTC25Q96NG3 672 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 SH3GL1Q99961 368 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 P2RY13Q9BPV8 354 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 IFI27L2Q9H2X8 130 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 CRLF2Q9HC73 371 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 UFSP2Q9NUQ7 469 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 SMOXQ9NWM0 555 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 MEMO1Q9Y316 297 aa3.04□□□□□ -1.92
NCKAP1-208ENST00000495619 SLIT3O75094 1523 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 MAP3K15Q6ZN16 1313 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 CTAGE15A4D2H0 777 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 METTL21EPA6NDL7 271 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 LRRIQ4A6NIV6 560 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 GPR89AB7ZAQ6 455 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 H0YHG0 523 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 CETN3O15182 167 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 PRKAB2O43741 272 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 TNFSF13O75888 250 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 AP2A1O95782 977 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 GPR89BP0CG08 455 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 GCAP28676 217 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 SHMT2P34897 504 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 SLC26A3P40879 764 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 GRIA1P42261 906 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 RPS9P46781 194 aaKnown RBP3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 CASP4P49662 377 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 EFNB2P52799 333 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 DLX1P56177 255 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 SPIBQ01892 262 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 VGLL4Q14135 290 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 SFT2D3Q587I9 215 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 CFAP157Q5JU67 520 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 AADACL4Q5VUY2 407 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 RFLNAQ6ZTI6 216 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 CTAGE6Q86UF2 777 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 RALGPS2Q86X27 583 aaPredicted RBP3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 VSTM4Q8IW00 320 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 LYPD1Q8N2G4 141 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 LINC00469Q8N7U9 141 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 CCDC54Q8NEL0 328 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 OR4K14Q8NGD5 310 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 OR52K1Q8NGK4 314 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 AGR3Q8TD06 166 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 TMEM158Q8WZ71 300 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 STARD8Q92502 1023 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 UBE2E3Q969T4 207 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 COQ2Q96H96 371 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 C8orf76Q96K31 380 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 CEP170P1Q96L14 293 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 TCEANC2Q96MN5 208 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 RTBDNQ9BSG5 229 aaPredicted RBP3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 ZSCAN5AQ9BUG6 496 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 RSPO3Q9BXY4 272 aaPredicted RBP3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 TM9SF3Q9HD45 589 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 NMRK1Q9NWW6 199 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 CHMP5Q9NZZ3 219 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 COPS3Q9UNS2 423 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 TIMM10BQ9Y5J6 103 aa3.03□□□□□ -1.92
NCKAP1-208ENST00000495619 PHF3Q92576 2039 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms