RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 FOXF1Q12946 379 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 HNRNPA0Q13151 305 aaKnown RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 RGS21Q2M5E4 152 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 BTBD16Q32M84 506 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 TP53I3Q53FA7 332 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 SLC25A53Q5H9E4 307 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 ZNF684Q5T5D7 378 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 GPR139Q6DWJ6 353 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 C5orf46Q6UWT4 87 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 JAZF1Q86VZ6 243 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 MARCH9Q86YJ5 346 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 PARP16Q8N5Y8 322 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 OR11G2Q8NGC1 345 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 OR6S1Q8NH40 331 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 ZNF519Q8TB69 540 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 SLC22A8Q8TCC7 542 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 ASB15Q8WXK1 588 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 TMEM234Q8WY98 164 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 NTNG2Q96CW9 530 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 PELI1Q96FA3 418 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 WDFY2Q96P53 400 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 SDHCQ99643 169 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 MROQ9BYG7 248 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 TTTY10Q9BZA0 68 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 PPIL3Q9H2H8 161 aaKnown RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 MIXL1Q9H2W2 232 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 TPK1Q9H3S4 243 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 NCDNQ9UBB6 729 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 CRNNQ9UBG3 495 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 GRHPRQ9UBQ7 328 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 POLHQ9Y253 713 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 GRIP1Q9Y3R0 1128 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 LOXL2Q9Y4K0 774 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 WIF1Q9Y5W5 379 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 DOCK10Q96BY6 2186 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 FREM3P0C091 2139 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 A0A1W2PNU3 283 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 SMIM30A4D0T7 59 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 SLC35F4A4IF30 521 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 FAM171A2A8MVW0 826 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 PLPP3O14495 311 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 OGG1O15527 345 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 UPK1BO75841 260 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 RGS9O75916 674 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 AHSA1O95433 338 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 IGHMP01871 453 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 HIST1H2ABP04908 130 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 IL11P20809 199 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 S100A5P33763 92 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 CAPZA2P47755 286 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 CLDN6P56747 220 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 OXA1LQ15070 435 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 SF3A2Q15428 464 aaKnown RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 INPP5JQ15735 1006 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 PLPPR5Q32ZL2 321 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 C11orf91Q3C1V1 193 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 EEF1A1P5Q5VTE0 462 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 ARL9Q6T311 187 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 HIST3H2AQ7L7L0 130 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 TIPARPQ7Z3E1 657 aaKnown RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 NR2C2APQ86WQ0 139 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 LAX1Q8IWV1 398 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 TIGD4Q8IY51 512 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 OR6V1Q8N148 313 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 ZNF511Q8NB15 262 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 NLGN4YQ8NFZ3 816 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 OR6K6Q8NGW6 343 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 ZNF417Q8TAU3 575 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 POC1BQ8TC44 478 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 RPS4Y2Q8TD47 263 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 HIST1H2ACQ93077 130 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 SLC25A36Q96CQ1 311 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 FRMD6Q96NE9 622 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 ZNF587Q96SQ5 575 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 CMKLR1Q99788 373 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 SPRY4Q9C004 299 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 RNF32Q9H0A6 362 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 MRPL39Q9NYK5 338 aaKnown RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 KLRF1Q9NZS2 232 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 GSTK1Q9Y2Q3 226 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 KLHDC2Q9Y2U9 406 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 CHCHD2Q9Y6H1 151 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 V9GYH0 126 aa9.59□□□□□ -0.87
PRPF4B-209ENST00000494674 MED12Q93074 2177 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 KIAA1549Q9HCM3 1950 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 SHISA8B8ZZ34 492 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 C11orf98E9PRG8 122 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 ITGA10O75578 1167 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 STK17BO94768 372 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 DLGAP3O95886 979 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 MSX1P28360 303 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 APOBEC1P41238 236 aaKnown RBP9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 CASP3P42574 277 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 CAV3P56539 151 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 TAS2R43P59537 309 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 ACTA2P62736 377 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 ACTG2P63267 376 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 ATP1A4Q13733 1029 aa9.58□□□□□ -0.88
PRPF4B-209ENST00000494674 EXT1Q16394 746 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms