RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SLC7A13Q8TCU3 470 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 UPB1Q9UBR1 384 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 NDRG3Q9UGV2 375 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 PRSS50Q9UI38 385 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 AURKCQ9UQB9 309 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 USP9YO00507 2555 aaPredicted RBP11.04□□□□□ -0.64
TRA2A-209ENST00000494255 SPTAN1Q13813 2472 aaKnown RBP11.04□□□□□ -0.64
TRA2A-209ENST00000494255 TRBV4-1A0A0J9YWV2 114 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 OR6C65A6NJZ3 312 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 EFCAB9A8MZ26 197 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 RNF13O43567 381 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 SERPINI2O75830 405 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 KRT33AO76009 404 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 KRT36O76013 467 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 HPRP00739 348 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 ADAP00813 363 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 RRM2P31350 389 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 UGT2B10P36537 528 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 MAGEA2P43356 314 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 POU3F1Q03052 451 aaPredicted RBP11.04□□□□□ -0.64
TRA2A-209ENST00000494255 ZP4Q12836 540 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 SNTB1Q13884 538 aaKnown RBP11.04□□□□□ -0.64
TRA2A-209ENST00000494255 P2RY6Q15077 328 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 FBXW9Q5XUX1 488 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 NIPAL3Q6P499 406 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 TBPL2Q6SJ96 375 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 ABHD12BQ7Z5M8 362 aaPredicted RBP11.04□□□□□ -0.64
TRA2A-209ENST00000494255 CXorf67Q86X51 503 aaPredicted RBP11.04□□□□□ -0.64
TRA2A-209ENST00000494255 LIPHQ8WWY8 451 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 HDHD5Q9BXW7 423 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 SLCO5A1Q9H2Y9 848 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 TMCC3Q9ULS5 477 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 RCE1Q9Y256 329 aa11.04□□□□□ -0.64
TRA2A-209ENST00000494255 TRAF3IP2O43734 574 aaPredicted RBP11.03□□□□□ -0.64
TRA2A-209ENST00000494255 SLC43A1O75387 559 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 IGHV3-9P01782 118 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 MAKP20794 623 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 IL32P24001 234 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 EDNRAP25101 427 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 NTF4P34130 210 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 GPR4P46093 362 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 SLC9A3P48764 834 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 FAPQ12884 760 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 C1orf146Q5VVC0 180 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 STAC2Q6ZMT1 411 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 ASRGL1Q7L266 308 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 ADGRG5Q8IZF4 528 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 GABRG1Q8N1C3 465 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 POMGNT2Q8NAT1 580 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 STEAP2Q8NFT2 490 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 OR4K5Q8NGD3 323 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 FAM222BQ8WU58 562 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 CANT1Q8WVQ1 401 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 RSRC1Q96IZ7 334 aaKnown RBP11.03□□□□□ -0.64
TRA2A-209ENST00000494255 YY1AP1Q9H869 796 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 ASB6Q9NWX5 421 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 TAS2R5Q9NYW4 299 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 MALT1Q9UDY8 824 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 GPR52Q9Y2T5 361 aa11.03□□□□□ -0.64
TRA2A-209ENST00000494255 A0A1W2PRG6 482 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 SH3PXD2BA1X283 911 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 TNFRSF11BO00300 401 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 HLA-DOBP13765 273 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 PSMB1P20618 241 aaKnown RBP11.02□□□□□ -0.64
TRA2A-209ENST00000494255 IFNGR2P38484 337 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 SELENOPP49908 381 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 LSM11P83369 360 aaKnown RBP eCLIP11.02□□□□□ -0.64
TRA2A-209ENST00000494255 RPL18Q07020 188 aaKnown RBP11.02□□□□□ -0.64
TRA2A-209ENST00000494255 ITGADQ13349 1161 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 ANKDD1AQ495B1 522 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 SFRP5Q5T4F7 317 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 ZNF787Q6DD87 383 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 OR2T5Q6IEZ7 315 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 OAFQ86UD1 273 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 OR2T29Q8NH02 315 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 LINC01560Q8TB33 94 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 KISS1RQ969F8 398 aaPredicted RBP11.02□□□□□ -0.64
TRA2A-209ENST00000494255 MARVELD3Q96A59 401 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 ALPK1Q96QP1 1244 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 MED18Q9BUE0 208 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 CHID1Q9BWS9 393 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 NDEL1Q9GZM8 345 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 SLC7A10Q9NS82 523 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 KCNN3Q9UGI6 736 aa11.02□□□□□ -0.64
TRA2A-209ENST00000494255 FREM1Q5H8C1 2179 aa11.02□□□□□ -0.65
TRA2A-209ENST00000494255 PTPN13Q12923 2485 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 TCRBV3S1A0A5B6 114 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 CIB4A0PJX0 185 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 SH3D21A4FU49 640 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 ZNF726A6NNF4 738 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 CASKO14936 926 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 OR10H3O60404 316 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 PPP3CBP16298 524 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 AQP2P41181 271 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 ERFP50548 548 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 SEC23BQ15437 767 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 TAF11Q15544 211 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 TSPO2Q5TGU0 170 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 TMPRSS11FQ6ZWK6 438 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 SLC35D2Q76EJ3 337 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms