RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ALG12Q9BV10 488 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 C6orf62Q9GZU0 229 aaPredicted RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 MRPL39Q9NYK5 338 aaKnown RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 CRNNQ9UBG3 495 aaPredicted RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF346Q9UL40 294 aaKnown RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 FARSAQ9Y285 508 aaKnown RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 CHCHD2Q9Y6H1 151 aaPredicted RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 MUC3AQ02505 3323 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 MYO15AQ9UKN7 3530 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 CCDC187A0A096LP49 1063 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 J3QRK9 145 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 PLPP3O14495 311 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 TRIM3O75382 744 aaPredicted RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 OR6A2O95222 327 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 TFP02787 698 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 CELA2AP08217 269 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 GRPRP30550 384 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 IDUAP35475 653 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 SSR4P51571 173 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 HSF2Q03933 536 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 TRAM1Q15629 374 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 PLPPR5Q32ZL2 321 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 LINC01590Q5TEZ4 76 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 VASH1Q7L8A9 365 aaPredicted RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 TIPARPQ7Z3E1 657 aaKnown RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 SYS1Q8N2H4 156 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ARIH2OSQ8N7S6 290 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 SUMF1Q8NBK3 374 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 OR51L1Q8NGJ5 315 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 OR2T4Q8NH00 348 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 CT55Q8WUE5 264 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ASB15Q8WXK1 588 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 C4orf36Q96KX1 117 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 FRMD6Q96NE9 622 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 SNX18Q96RF0 628 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 POTEKPQ9BYX7 375 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 OR11A1Q9GZK7 315 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 NUAK2Q9H093 628 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF160Q9HCG1 818 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 RPRD1BQ9NQG5 326 aaKnown RBP12.69□□□□□ -0.38
PTPN7-216ENST00000492977 VDAC3Q9Y277 283 aa12.69□□□□□ -0.38
PTPN7-216ENST00000492977 GPR179Q6PRD1 2367 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 FAM47E-STBD1D6RA91 191 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 FTCDNL1E5RQL4 147 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 J3QLW9 94 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 TAF4O00268 1085 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 RNF13O43567 381 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 PLPP2O43688 288 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 SERPINI2O75830 405 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 IGHMP01871 453 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF19P17023 458 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 MLF1P58340 268 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 RPL27P61353 136 aaKnown RBP12.68□□□□□ -0.38
PTPN7-216ENST00000492977 RPS15P62841 145 aaKnown RBP12.68□□□□□ -0.38
PTPN7-216ENST00000492977 ZP4Q12836 540 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 FOXF1Q12946 379 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 TBC1D25Q3MII6 688 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 MESTQ5EB52 335 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 TMEM164Q5U3C3 297 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 SLC6A19Q695T7 634 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 VASNQ6EMK4 673 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 IL20RBQ6UXL0 311 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 PPP1R32Q7Z5V6 425 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 RPS19BP1Q86WX3 136 aaKnown RBP12.68□□□□□ -0.38
PTPN7-216ENST00000492977 EGFL6Q8IUX8 553 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 GHDCQ8N2G8 530 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 FADS6Q8N9I5 356 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 SCAIQ8N9R8 606 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 OR2M3Q8NG83 312 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 OR6K6Q8NGW6 343 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 ZNRF4Q8WWF5 429 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 SLC25A46Q96AG3 418 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 TMED9Q9BVK6 235 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 TXNIPQ9H3M7 391 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 CDCP1Q9H5V8 836 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 PTGES2Q9H7Z7 377 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 SERINC1Q9NRX5 453 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 SNTG1Q9NSN8 517 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 ZMIZ1Q9ULJ6 1067 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 POLHQ9Y253 713 aa12.68□□□□□ -0.38
PTPN7-216ENST00000492977 C9orf172C9J069 976 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 C11orf98E9PRG8 122 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 XKRYO14609 159 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 CDRT1O95170 752 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 HPP00738 406 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 FKBP2P26885 142 aaKnown RBP12.67□□□□□ -0.38
PTPN7-216ENST00000492977 CALRP27797 417 aaKnown RBP12.67□□□□□ -0.38
PTPN7-216ENST00000492977 NAA10P41227 235 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-216ENST00000492977 OR12D2P58182 307 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 CDONQ4KMG0 1287 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 SLC16A9Q7RTY1 509 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 ESX1Q8N693 406 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF248Q8NDW4 579 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF417Q8TAU3 575 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 SMAP2Q8WU79 429 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF587Q96SQ5 575 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-216ENST00000492977 NPAS1Q99742 590 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 GALNT8Q9NY28 637 aa12.67□□□□□ -0.38
PTPN7-216ENST00000492977 SIRT4Q9Y6E7 314 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-216ENST00000492977 A0A1B0GVG6 124 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms