RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 SCFD1Q8WVM8 642 aa2.55□□□□□ -2
VTA1-204ENST00000491881 C10orf35Q96D05 121 aa2.55□□□□□ -2
VTA1-204ENST00000491881 SLC41A3Q96GZ6 507 aa2.55□□□□□ -2
VTA1-204ENST00000491881 ZNF285Q96NJ3 590 aa2.55□□□□□ -2
VTA1-204ENST00000491881 OXGR1Q96P68 337 aa2.55□□□□□ -2
VTA1-204ENST00000491881 MTMR9Q96QG7 549 aa2.55□□□□□ -2
VTA1-204ENST00000491881 TMEM246Q9BRR3 403 aa2.55□□□□□ -2
VTA1-204ENST00000491881 GBA3Q9H227 469 aa2.55□□□□□ -2
VTA1-204ENST00000491881 LRRC40Q9H9A6 602 aa2.55□□□□□ -2
VTA1-204ENST00000491881 GIN1Q9NXP7 522 aa2.55□□□□□ -2
VTA1-204ENST00000491881 MMP17Q9ULZ9 603 aa2.55□□□□□ -2
VTA1-204ENST00000491881 PIGLQ9Y2B2 252 aa2.55□□□□□ -2
VTA1-204ENST00000491881 ZFHX4Q86UP3 3567 aa2.55□□□□□ -2
VTA1-204ENST00000491881 GOLGB1Q14789 3259 aaKnown RBP2.55□□□□□ -2
VTA1-204ENST00000491881 COL6A3P12111 3177 aa2.55□□□□□ -2
VTA1-204ENST00000491881 CDK12Q9NYV4 1490 aaPredicted RBP2.54□□□□□ -2
VTA1-204ENST00000491881 BAZ1BQ9UIG0 1483 aaKnown RBP2.54□□□□□ -2
VTA1-204ENST00000491881 FANCIQ9NVI1 1328 aa2.54□□□□□ -2
VTA1-204ENST00000491881 A0A0G2JN53 185 aa2.54□□□□□ -2
VTA1-204ENST00000491881 A0A1B0GVL5 298 aa2.54□□□□□ -2
VTA1-204ENST00000491881 NKX2-6A6NCS4 301 aa2.54□□□□□ -2
VTA1-204ENST00000491881 FAM166BA8MTA8 275 aa2.54□□□□□ -2
VTA1-204ENST00000491881 KRTAP4-16G5E9R7 235 aaPredicted RBP2.54□□□□□ -2
VTA1-204ENST00000491881 NBR2O15453 112 aa2.54□□□□□ -2
VTA1-204ENST00000491881 TIMM8AO60220 97 aaPredicted RBP2.54□□□□□ -2
VTA1-204ENST00000491881 MOSP00540 346 aa2.54□□□□□ -2
VTA1-204ENST00000491881 IL1BP01584 269 aa2.54□□□□□ -2
VTA1-204ENST00000491881 HOXC4P09017 264 aaPredicted RBP2.54□□□□□ -2
VTA1-204ENST00000491881 PNMA6AP0CW24 399 aaPredicted RBP2.54□□□□□ -2
VTA1-204ENST00000491881 TOP1P11387 765 aaKnown RBP2.54□□□□□ -2
VTA1-204ENST00000491881 CRISP2P16562 243 aa2.54□□□□□ -2
VTA1-204ENST00000491881 SLC26A3P40879 764 aa2.54□□□□□ -2
VTA1-204ENST00000491881 EPS15P42566 896 aa2.54□□□□□ -2
VTA1-204ENST00000491881 UBE2HP62256 183 aa2.54□□□□□ -2
VTA1-204ENST00000491881 ERVK-25P63136 954 aa2.54□□□□□ -2
VTA1-204ENST00000491881 OGDHQ02218 1023 aa2.54□□□□□ -2
VTA1-204ENST00000491881 MECOMQ03112 1051 aa2.54□□□□□ -2
VTA1-204ENST00000491881 ACVR1Q04771 509 aa2.54□□□□□ -2
VTA1-204ENST00000491881 MRPL28Q13084 256 aaKnown RBP2.54□□□□□ -2
VTA1-204ENST00000491881 IMMTQ16891 758 aaKnown RBP2.54□□□□□ -2
VTA1-204ENST00000491881 LRRC10Q5BKY1 277 aa2.54□□□□□ -2
VTA1-204ENST00000491881 AGBL2Q5U5Z8 902 aa2.54□□□□□ -2
VTA1-204ENST00000491881 CTRB2Q6GPI1 263 aa2.54□□□□□ -2
VTA1-204ENST00000491881 EFL1Q7Z2Z2 1120 aaKnown RBP2.54□□□□□ -2
VTA1-204ENST00000491881 DHDDSQ86SQ9 333 aa2.54□□□□□ -2
VTA1-204ENST00000491881 TGIF2LXQ8IUE1 241 aa2.54□□□□□ -2
VTA1-204ENST00000491881 FAM133AQ8N9E0 248 aa2.54□□□□□ -2
VTA1-204ENST00000491881 BHLHE23Q8NDY6 225 aa2.54□□□□□ -2
VTA1-204ENST00000491881 TRPV1Q8NER1 839 aa2.54□□□□□ -2
VTA1-204ENST00000491881 PYROXD1Q8WU10 500 aa2.54□□□□□ -2
VTA1-204ENST00000491881 ACOT11Q8WXI4 607 aaPredicted RBP2.54□□□□□ -2
VTA1-204ENST00000491881 IL22RA2Q969J5 263 aa2.54□□□□□ -2
VTA1-204ENST00000491881 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.54□□□□□ -2
VTA1-204ENST00000491881 FAM210BQ96KR6 192 aa2.54□□□□□ -2
VTA1-204ENST00000491881 TCEANC2Q96MN5 208 aa2.54□□□□□ -2
VTA1-204ENST00000491881 PSKH2Q96QS6 385 aa2.54□□□□□ -2
VTA1-204ENST00000491881 PELOQ9BRX2 385 aaKnown RBP2.54□□□□□ -2
VTA1-204ENST00000491881 SRMSQ9H3Y6 488 aa2.54□□□□□ -2
VTA1-204ENST00000491881 AZI2Q9H6S1 392 aa2.54□□□□□ -2
VTA1-204ENST00000491881 EML4Q9HC35 981 aaKnown RBP2.54□□□□□ -2
VTA1-204ENST00000491881 MRPL47Q9HD33 250 aaKnown RBP2.54□□□□□ -2
VTA1-204ENST00000491881 CCL28Q9NRJ3 127 aa2.54□□□□□ -2
VTA1-204ENST00000491881 GLRX2Q9NS18 164 aa2.54□□□□□ -2
VTA1-204ENST00000491881 ZNF223Q9UK11 482 aaPredicted RBP2.54□□□□□ -2
VTA1-204ENST00000491881 N6AMT1Q9Y5N5 214 aa2.54□□□□□ -2
VTA1-204ENST00000491881 WSB1Q9Y6I7 421 aa2.54□□□□□ -2
VTA1-204ENST00000491881 CHD1O14646 1710 aa2.54□□□□□ -2
VTA1-204ENST00000491881 CHD4Q14839 1912 aa2.53□□□□□ -2
VTA1-204ENST00000491881 A0A0G2JLM5 398 aa2.53□□□□□ -2
VTA1-204ENST00000491881 CLRN2A0PK11 232 aa2.53□□□□□ -2
VTA1-204ENST00000491881 SNTNA6NMZ2 147 aa2.53□□□□□ -2
VTA1-204ENST00000491881 C12orf77C9JDV5 145 aa2.53□□□□□ -2
VTA1-204ENST00000491881 SLC25A27O95847 323 aa2.53□□□□□ -2
VTA1-204ENST00000491881 TSPAN12O95859 305 aa2.53□□□□□ -2
VTA1-204ENST00000491881 SLC2A5P22732 501 aa2.53□□□□□ -2
VTA1-204ENST00000491881 OPRD1P41143 372 aa2.53□□□□□ -2
VTA1-204ENST00000491881 SCRN3Q0VDG4 424 aa2.53□□□□□ -2
VTA1-204ENST00000491881 KIAA0087Q14695 138 aa2.53□□□□□ -2
VTA1-204ENST00000491881 GPNMBQ14956 572 aa2.53□□□□□ -2
VTA1-204ENST00000491881 CENPPQ6IPU0 288 aa2.53□□□□□ -2
VTA1-204ENST00000491881 TRIM69Q86WT6 500 aa2.53□□□□□ -2
VTA1-204ENST00000491881 ZNF679Q8IYX0 411 aa2.53□□□□□ -2
VTA1-204ENST00000491881 EIF1ADQ8N9N8 165 aaKnown RBP2.53□□□□□ -2
VTA1-204ENST00000491881 MDS2Q8NDY4 140 aa2.53□□□□□ -2
VTA1-204ENST00000491881 ACER1Q8TDN7 264 aa2.53□□□□□ -2
VTA1-204ENST00000491881 IFT74Q96LB3 600 aa2.53□□□□□ -2
VTA1-204ENST00000491881 HDHD3Q9BSH5 251 aaPredicted RBP2.53□□□□□ -2
VTA1-204ENST00000491881 TRIM62Q9BVG3 475 aa2.53□□□□□ -2
VTA1-204ENST00000491881 RIOK2Q9BVS4 552 aaKnown RBP2.53□□□□□ -2
VTA1-204ENST00000491881 NT5C3AQ9H0P0 336 aa2.53□□□□□ -2
VTA1-204ENST00000491881 DEFB127Q9H1M4 99 aa2.53□□□□□ -2
VTA1-204ENST00000491881 PPA2Q9H2U2 334 aa2.53□□□□□ -2
VTA1-204ENST00000491881 SGK2Q9HBY8 427 aa2.53□□□□□ -2
VTA1-204ENST00000491881 SLC25A37Q9NYZ2 338 aa2.53□□□□□ -2
VTA1-204ENST00000491881 PRG3Q9Y2Y8 225 aaPredicted RBP2.53□□□□□ -2
VTA1-204ENST00000491881 PDE4DIPQ5VU43 2346 aa2.53□□□□□ -2
VTA1-204ENST00000491881 MAPKBP1O60336 1514 aa2.52□□□□□ -2.01
VTA1-204ENST00000491881 VCANP13611 3396 aa2.52□□□□□ -2.01
VTA1-204ENST00000491881 SZT2Q5T011 3432 aa2.52□□□□□ -2.01
VTA1-204ENST00000491881 PES1O00541 588 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms