RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 VAMP5O95183 116 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 BGLAPP02818 100 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 CD8BP10966 210 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 CRYGSP22914 178 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 GTF2E2P29084 291 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 UGT2B10P36537 528 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 P2RY4P51582 365 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 SMIM11AP58511 58 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 OTUD3Q5T2D3 398 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 C1orf146Q5VVC0 180 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 FAM214BQ7L5A3 538 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 BIVMQ86UB2 503 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 SPATA24Q86W54 205 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 P3H2Q8IVL5 708 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 RNF113BQ8IZP6 322 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 SLC7A13Q8TCU3 470 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 LIPHQ8WWY8 451 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 DNAJA3Q96EY1 480 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 SMR3AQ99954 134 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 FUZQ9BT04 418 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 SF3B5Q9BWJ5 86 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 FKRPQ9H9S5 495 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 RHCGQ9UBD6 479 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 B3GALT5Q9Y2C3 310 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 EMC9Q9Y3B6 208 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 MED31Q9Y3C7 131 aa13.31□□□□□ -0.28
CDC42SE1-205ENST00000491825 CASKO14936 926 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 CIB2O75838 187 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 DIRAS1O95057 198 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 AKR7A3O95154 331 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 PLGP00747 810 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 PTNP21246 168 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 FUT4P22083 530 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 LOXP28300 417 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 AGTR1P30556 359 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 CTBP2P56545 445 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 SIRPAP78324 504 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 LTBQ06643 244 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 RASGEF1BQ0VAM2 473 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 GK3PQ14409 553 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 C22orf34Q6ZV56 151 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 MBOAT2Q6ZWT7 520 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 PAPD5Q8NDF8 572 aaKnown RBP13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 OR6K3Q8NGY3 331 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 PFN4Q8NHR9 129 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 CANT1Q8WVQ1 401 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 C18orf12Q96KH6 178 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 MOGAT1Q96PD6 335 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 FANCFQ9NPI8 374 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 MRPL39Q9NYK5 338 aaKnown RBP13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 ELOVL5Q9NYP7 299 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 EMC3Q9P0I2 261 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 RASD1Q9Y272 281 aa13.3□□□□□ -0.28
CDC42SE1-205ENST00000491825 ABCA2Q9BZC7 2435 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 A0A087WUU8 490 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 LOC102725191A0A1B0GVB3 256 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 M0R082 166 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 KPNA4O00629 521 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 GPR171O14626 319 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 RAMP1O60894 148 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 KRT36O76013 467 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 GADD45GO95257 159 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 YES1P07947 543 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 ASAH2BP0C7U1 165 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 POU2F1P14859 743 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 GRPRP30550 384 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 RRM2P31350 389 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 LIMS1P48059 325 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 NKX6-1P78426 367 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 SPIBQ01892 262 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 SLC17A1Q14916 467 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 ZSCAN26Q16670 478 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 SHEQ5VZ18 495 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 ZNF730Q6ZMV8 503 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 SLC46A3Q7Z3Q1 461 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 LRRC75A-AS1Q8N1F1 130 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 TMEM99Q8N816 258 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 ZNF417Q8TAU3 575 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 SLC25A36Q96CQ1 311 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 DUS3LQ96G46 650 aaKnown RBP13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 RAB3IPQ96QF0 476 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 HS3ST6Q96QI5 342 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 ZNF587Q96SQ5 575 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 MED18Q9BUE0 208 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 ASPNQ9BXN1 380 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 NANSQ9NR45 359 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 C20orf141Q9NUB4 165 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 ZNF226Q9NYT6 803 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 AURKCQ9UQB9 309 aa13.29□□□□□ -0.28
CDC42SE1-205ENST00000491825 NSD1Q96L73 2696 aaPredicted RBP13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 TRBV4-1A0A0J9YWV2 114 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 OR7A10O76100 309 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 CH25HO95992 272 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 INHBBP09529 407 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 TSPAN19P0C672 248 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 HMGA2P52926 109 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 PRKCDQ05655 676 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 CCNIQ14094 377 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 FGD3Q5JSP0 725 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms