RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 CHIAQ9BZP6 476 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 ZNF304Q9HCX3 659 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 PRTFDC1Q9NRG1 225 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 MED17Q9NVC6 651 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 IL20Q9NYY1 176 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 MRPL15Q9P015 296 aaKnown RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 SLC13A4Q9UKG4 626 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 NPTNQ9Y639 398 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 A0A087WV62 115 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 TRABD2BA6NFA1 517 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 REM1O75628 298 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 PPM1BO75688 479 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 HMGN2P05204 90 aaKnown RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 SLC35E2P0CK97 266 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 SNRPBP14678 240 aaKnown RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 FBLP22087 321 aaKnown RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 PAICSP22234 425 aaKnown RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 IL32P24001 234 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 GALNSP34059 522 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 MMP15P51511 669 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 GBX2P52951 348 aaPredicted RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 SNTB2Q13425 540 aaKnown RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 SERTAD2Q14140 314 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 GNA13Q14344 377 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 ARHGAP40Q5TG30 622 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 SFRP4Q6FHJ7 346 aaPredicted RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 ZNF620Q6ZNG0 422 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 Q6ZTK2 550 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 MEPCEQ7L2J0 689 aaKnown RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 TPRA1Q86W33 373 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 PPP1R3BQ86XI6 285 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 CMIPQ8IY22 773 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 IZUMO1Q8IYV9 350 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 OR2T33Q8NG76 320 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 OR56B4Q8NH76 319 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 DOK4Q8TEW6 326 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 TMEM255BQ8WV15 326 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 THAP4Q8WY91 577 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 ELP4Q96EB1 424 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 ARHGDIGQ99819 225 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 MKKSQ9NPJ1 570 aaPredicted RBP8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 TRIM36Q9NQ86 728 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 SDHAF2Q9NX18 166 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 KIF25Q9UIL4 384 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 SPATA2Q9UM82 520 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 FLVCR2Q9UPI3 526 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 KCNMB2Q9Y691 235 aa8.24□□□□□ -1.09
EXOSC1-211ENST00000489158 B4E171 279 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 LRRN3E7EW58 273 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 KLF4O43474 513 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 HYAL3O43820 417 aaPredicted RBP8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 SCRG1O75711 98 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 UBL3O95164 117 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ONECUT2O95948 504 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 THY1P04216 161 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 HMGN1P05114 100 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ICAM2P13598 275 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ZP3P21754 424 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ACVR1BP36896 505 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 TSPAN7P41732 249 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 RAG2P55895 527 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 PITPNAQ00169 270 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 KLF9Q13886 244 aaPredicted RBP8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ZMYND11Q15326 602 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 DECR1Q16698 335 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 TUSC1Q2TAM9 212 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 NIPAL3Q6P499 406 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 GDF7Q7Z4P5 450 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 UXS1Q8NBZ7 420 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 OR6M1Q8NGM8 313 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ACOT11Q8WXI4 607 aaPredicted RBP8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ST8SIA4Q92187 359 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ANKRD9Q96BM1 317 aaPredicted RBP8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 RBM18Q96H35 190 aaKnown RBP8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ZNF578Q96N58 590 aaPredicted RBP8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 SFXN2Q96NB2 322 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 MS4A4EQ96PG1 132 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 DDOQ99489 341 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 STRADBQ9C0K7 418 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 C20orf85Q9H1P6 137 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 UBQLN3Q9H347 655 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ZC4H2Q9NQZ6 224 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 RPS6KB2Q9UBS0 482 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 SEC16AO15027 2179 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 CACNA1HO95180 2353 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 A0A1W2PPK0 400 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 OR2W5A6NFC9 320 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 MFSD2BA6NFX1 497 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 TUBAL3A6NHL2 446 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 C4orf47A7E2U8 309 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 EFCAB7A8K855 629 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 J3QLW9 94 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 CDC42EP2O14613 210 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 TOR1AO14656 332 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 AGR2O95994 175 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 IFNA16P05015 189 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 ALDOBP05062 364 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 CYC1P08574 325 aa8.23□□□□□ -1.09
EXOSC1-211ENST00000489158 MRPL3P09001 348 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms