RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 RPS4XP62701 263 aaKnown RBP16.46■□□□□ 0.23
PTCD3-217ENST00000488801 TRAP1Q12931 704 aaKnown RBP16.46■□□□□ 0.23
PTCD3-217ENST00000488801 DAZAP2Q15038 168 aaPredicted RBP16.46■□□□□ 0.23
PTCD3-217ENST00000488801 SFRP5Q5T4F7 317 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 PXKQ7Z7A4 578 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 CYP4Z1Q86W10 505 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 ZNF100Q8IYN0 542 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 RNF113BQ8IZP6 322 aaKnown RBP16.46■□□□□ 0.23
PTCD3-217ENST00000488801 TMEM123Q8N131 208 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 CCDC124Q96CT7 223 aaKnown RBP16.46■□□□□ 0.23
PTCD3-217ENST00000488801 PIP5K1AQ99755 562 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 CADM1Q9BY67 442 aaKnown RBP16.46■□□□□ 0.23
PTCD3-217ENST00000488801 MAGIXQ9H6Y5 334 aa16.46■□□□□ 0.23
PTCD3-217ENST00000488801 DNAJC8O75937 253 aaPredicted RBP16.45■□□□□ 0.22
PTCD3-217ENST00000488801 ATP5HO75947 161 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 GOSR1O95249 250 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 ADAP00813 363 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 H1F0P07305 194 aaKnown RBP16.45■□□□□ 0.22
PTCD3-217ENST00000488801 ITGA5P08648 1049 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 HLA-DOBP13765 273 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 ZNF43P17038 809 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 ITGA2P17301 1181 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 SELENOPP49908 381 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 PRKCDQ05655 676 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 ITGADQ13349 1161 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 PMS2P3Q13401 168 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 FHL1Q13642 323 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 TSPO2Q5TGU0 170 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 SEZ6L2Q6UXD5 910 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 MBOAT2Q6ZWT7 520 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 AAED1Q7RTV5 226 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 WDFY1Q8IWB7 410 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 NRMQ8IXM6 262 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 ZNF433Q8N7K0 673 aaPredicted RBP16.45■□□□□ 0.22
PTCD3-217ENST00000488801 POP5Q969H6 163 aaKnown RBP16.45■□□□□ 0.22
PTCD3-217ENST00000488801 SGTBQ96EQ0 304 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 WFIKKN1Q96NZ8 548 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 SLCO5A1Q9H2Y9 848 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 SLC7A10Q9NS82 523 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 C6orf203Q9P0P8 240 aaPredicted RBP16.45■□□□□ 0.22
PTCD3-217ENST00000488801 NOX1Q9Y5S8 564 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 DSCAMO60469 2012 aa16.45■□□□□ 0.22
PTCD3-217ENST00000488801 GSC2O15499 205 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 DIRAS1O95057 198 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 FABP3P05413 133 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 THBDP07204 575 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 NQO1P15559 274 aaKnown RBP16.44■□□□□ 0.22
PTCD3-217ENST00000488801 PPP3CBP16298 524 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 SSTR2P30874 369 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 FOXG1P55316 489 aaPredicted RBP16.44■□□□□ 0.22
PTCD3-217ENST00000488801 CLDN17P56750 224 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 POU3F1Q03052 451 aaPredicted RBP16.44■□□□□ 0.22
PTCD3-217ENST00000488801 UEVLDQ8IX04 471 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 C10orf53Q8N6V4 93 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 POMGNT2Q8NAT1 580 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 BPIFA2Q96DR5 249 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 BOD1Q96IK1 185 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 OR2M2Q96R28 347 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 HDHD5Q9BXW7 423 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 LINC00470Q9BZP3 86 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 LRMDAQ9H2I8 198 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 HIF3AQ9Y2N7 669 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 CSMD2Q7Z408 3487 aa16.44■□□□□ 0.22
PTCD3-217ENST00000488801 TRBV4-1A0A0J9YWV2 114 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 OR6C65A6NJZ3 312 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 A6NNC1 897 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 SIAH2O43255 324 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 IGHV3-9P01782 118 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 ADORA3P0DMS8 318 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 IFI30P13284 250 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 FUT1P19526 365 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 MAKP20794 623 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 CRYGSP22914 178 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 LIMS1P48059 325 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 RPL18Q07020 188 aaKnown RBP16.43■□□□□ 0.22
PTCD3-217ENST00000488801 SEC23BQ15437 767 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 PODNL1Q6PEZ8 512 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 TBPL2Q6SJ96 375 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 TMPRSS11FQ6ZWK6 438 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 LINGO2Q7L985 606 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 NANOGNBQ7Z5D8 188 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 ZDHHC21Q8IVQ6 265 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 ANKK1Q8NFD2 765 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 STEAP2Q8NFT2 490 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 KISS1RQ969F8 398 aaPredicted RBP16.43■□□□□ 0.22
PTCD3-217ENST00000488801 ACTR6Q9GZN1 396 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 MCCC2Q9HCC0 563 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 ASB6Q9NWX5 421 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 TAS2R16Q9NYV7 291 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 SLC7A8Q9UHI5 535 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 FAM32AQ9Y421 112 aaKnown RBP16.43■□□□□ 0.22
PTCD3-217ENST00000488801 TEX15Q9BXT5 2789 aa16.43■□□□□ 0.22
PTCD3-217ENST00000488801 CSMD1Q96PZ7 3565 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 NPIPB13A6NJU9 1138 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 AQP12BA6NM10 295 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 NPIPB4C9JG80 1138 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 RPL36A-HNRNPH2H7BZ11 118 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 AKAP8O43823 692 aaKnown RBP16.42■□□□□ 0.22
PTCD3-217ENST00000488801 CTAG2O75638 210 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 LYZL6O75951 148 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms