RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 MED12Q93074 2177 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 LOC101059948A0A1B0GTJ6 334 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 ETV2O00321 342 aaPredicted RBP18.28■□□□□ 0.52
NECAB3-213ENST00000488489 TP53I11O14683 189 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 ATP6V1E1P36543 226 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 SSR4P51571 173 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 SLC16A1P53985 500 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 DLX5P56178 289 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 FOXF1Q12946 379 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 NANOGNBQ7Z5D8 188 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 SECISBP2Q96T21 854 aaKnown RBP18.28■□□□□ 0.52
NECAB3-213ENST00000488489 SDHAF3Q9NRP4 125 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 TAS2R5Q9NYW4 299 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 CRNNQ9UBG3 495 aaPredicted RBP18.28■□□□□ 0.52
NECAB3-213ENST00000488489 TNFRSF10DQ9UBN6 386 aa18.28■□□□□ 0.52
NECAB3-213ENST00000488489 TMEM129A0AVI4 362 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 OR6C68A6NDL8 312 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 EFNA2O43921 213 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 HPP00738 406 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 APOA1P02647 267 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 CD14P08571 375 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 IL11P20809 199 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 MSX1P28360 303 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 CTXN1P60606 82 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 RPS7P62081 194 aaKnown RBP18.27■□□□□ 0.52
NECAB3-213ENST00000488489 FAM69AQ5T7M9 428 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 ZNF485Q8NCK3 441 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 ZNRF4Q8WWF5 429 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 GATAD2BQ8WXI9 593 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 TM9SF4Q92544 642 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 FRMD6Q96NE9 622 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 TRAPPC4Q9Y296 219 aa18.27■□□□□ 0.52
NECAB3-213ENST00000488489 RBMX2Q9Y388 322 aaKnown RBP18.27■□□□□ 0.52
NECAB3-213ENST00000488489 EXOSC1Q9Y3B2 195 aaKnown RBP18.27■□□□□ 0.52
NECAB3-213ENST00000488489 TEX13CA0A0J9YWL9 993 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 SLC22A31A6NKX4 558 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 GPX5O75715 221 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 HIST1H2ABP04908 130 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 CCL3P10147 92 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 ICAM2P13598 275 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 PAICSP22234 425 aaKnown RBP18.26■□□□□ 0.51
NECAB3-213ENST00000488489 WNT4P56705 351 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 FOXK1P85037 733 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 PLPPR5Q32ZL2 321 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 B3GNTL1Q67FW5 361 aaPredicted RBP18.26■□□□□ 0.51
NECAB3-213ENST00000488489 HIST3H2AQ7L7L0 130 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 OR2M3Q8NG83 312 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 STK35Q8TDR2 534 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 HIST1H2ACQ93077 130 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 ARL5BQ96KC2 179 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 SLC30A2Q9BRI3 323 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 GPR87Q9BY21 358 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 PROK2Q9HC23 129 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 SH2D2AQ9NP31 389 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 ERVK13-1Q9NX77 482 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 KLHL21Q9UJP4 597 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 C21orf140B9A014 251 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 IDH3BO43837 385 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 RAD1O60671 282 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 SERPINI2O75830 405 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 APOBEC1P41238 236 aaKnown RBP18.26■□□□□ 0.51
NECAB3-213ENST00000488489 CDKN2AP42771 156 aaKnown RBP18.26■□□□□ 0.51
NECAB3-213ENST00000488489 CHAF1BQ13112 559 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 SNTA1Q13424 505 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 TMEM156Q8N614 296 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 IL17RDQ8NFM7 739 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 OR51L1Q8NGJ5 315 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 POC1BQ8TC44 478 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 SMAP2Q8WU79 429 aaPredicted RBP18.26■□□□□ 0.51
NECAB3-213ENST00000488489 CEP19Q96LK0 163 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 SMURF1Q9HCE7 757 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 NPAP1Q9NZP6 1156 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 GVINP1Q7Z2Y8 2422 aa18.26■□□□□ 0.51
NECAB3-213ENST00000488489 CTDSP2O14595 271 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 MT-ATP6P00846 226 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 TCEA1P23193 301 aaKnown RBP18.25■□□□□ 0.51
NECAB3-213ENST00000488489 C1DQ13901 141 aaKnown RBP18.25■□□□□ 0.51
NECAB3-213ENST00000488489 MAMDC2Q7Z304 686 aaPredicted RBP18.25■□□□□ 0.51
NECAB3-213ENST00000488489 CELF2-AS1Q8N7Q2 184 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 TMEM99Q8N816 258 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 KCNS3Q9BQ31 491 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 JAM3Q9BX67 310 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 RACGAP1Q9H0H5 632 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 SIAEQ9HAT2 523 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 ADGRL4Q9HBW9 690 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 FTCDNL1E5RQL4 147 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 MRPL3P09001 348 aaKnown RBP18.25■□□□□ 0.51
NECAB3-213ENST00000488489 GRPRP30550 384 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 NBL1P41271 181 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 ZNF41P51814 821 aaPredicted RBP18.25■□□□□ 0.51
NECAB3-213ENST00000488489 MLLT11Q13015 90 aaPredicted RBP18.25■□□□□ 0.51
NECAB3-213ENST00000488489 SLC25A53Q5H9E4 307 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 AGAP6Q5VW22 663 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 SLC6A19Q695T7 634 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 TMEM81Q6P7N7 255 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 MDGA2Q7Z553 956 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 FADS6Q8N9I5 356 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 PSD4Q8NDX1 1056 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 PAQR8Q8TEZ7 354 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 AGAP4Q96P64 663 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms