RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 RNF175Q8N4F7 328 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 ARIH2OSQ8N7S6 290 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 Q8N9W7 124 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 BHLHE23Q8NDY6 225 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 NPBQ8NG41 125 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 OR1L6Q8NGR2 347 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 SRSF12Q8WXF0 261 aaKnown RBP1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 FGF14Q92915 247 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 TCEANC2Q96MN5 208 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 MS4A4EQ96PG1 132 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 CCT7Q99832 543 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 PPA2Q9H2U2 334 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 FN3KRPQ9HA64 309 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 SIAEQ9HAT2 523 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 PLGRKTQ9HBL7 147 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 NMRAL1Q9HBL8 299 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 ZFP14Q9HCL3 533 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 GIN1Q9NXP7 522 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 BFARQ9NZS9 450 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 ZNF639Q9UID6 485 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 TMCO1Q9UM00 188 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 PIGLQ9Y2B2 252 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 SLC25A15Q9Y619 301 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 A0A0G2JN53 185 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 A0A1W2PPE3 182 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 CLRN2A0PK11 232 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 ARHGEF35A5YM69 484 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 TRIM49D1C9J1S8 452 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 B4GALT2O60909 372 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 PCCAP05165 728 aaPredicted RBP1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 TOP1P11387 765 aaKnown RBP1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 ATP1B2P14415 290 aaPredicted RBP1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 IL12AP29459 219 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 SCRN3Q0VDG4 424 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 PPIL2Q13356 520 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 MADCAM1Q13477 382 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 CYTH1Q15438 398 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 MPPED2Q15777 294 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 DGUOKQ16854 277 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 RSPO1Q2MKA7 263 aaPredicted RBP1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 LRRC23Q53EV4 343 aaPredicted RBP1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 PHYHD1Q5SRE7 291 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 LCN12Q6JVE5 192 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 KDELC1Q6UW63 502 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 NUDCD3Q8IVD9 361 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 TPRX1Q8N7U7 411 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 FAM83FQ8NEG4 500 aaPredicted RBP1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 ZNF606Q8WXB4 792 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 ACOT11Q8WXI4 607 aaPredicted RBP1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 TM4SF19Q96DZ7 209 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 PELOQ9BRX2 385 aaKnown RBP1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 CHRDL1Q9BU40 450 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 GCOM2Q9BZD3 368 aaPredicted RBP1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 ROGDIQ9GZN7 287 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 NT5C3AQ9H0P0 336 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 ANKRD19PQ9H560 264 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 KCNIP1Q9NZI2 227 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 SLC7A8Q9UHI5 535 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 WSB1Q9Y6I7 421 aa1.81□□□□□ -2.12
R3HDM1-219ENST00000488035 ARID1AO14497 2285 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 LRP4O75096 1905 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 TRBV6-6A0A0A6YYG2 114 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 IGKV1D-13A0A0B4J2D9 117 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 IGHV3-64DA0A0J9YX35 117 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 OR52A4PA6NMU1 304 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 HAS3O00219 553 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 CA11O75493 328 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 OR7A10O76100 309 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 SERPINA3P01011 423 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 PRB2P02812 416 aaPredicted RBP1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 HOXC4P09017 264 aaPredicted RBP1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 CT62P0C5K7 136 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 UBTFL1P0CB47 393 aaPredicted RBP1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 IGKV1-13P0DP09 117 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 TDGF1P13385 188 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 ABOP16442 354 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 CRISP2P16562 243 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 HNRNPH3P31942 346 aaKnown RBP1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 NPBWR2P48146 333 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 TPMTP51580 245 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 TDGF1P3P51864 188 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 FGF8P55075 233 aaPredicted RBP1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 UCNP55089 124 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 OGDHQ02218 1023 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 NCBP1Q09161 790 aaKnown RBP1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 BST1Q10588 318 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 ZNF77Q15935 545 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 C19orf35Q6ZS72 473 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 ASCL5Q7RTU5 278 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 ZNF429Q86V71 674 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 BLOC1S5Q8TDH9 187 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 PYROXD1Q8WU10 500 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 SMARCD2Q92925 531 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 NT5C3BQ969T7 300 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 PLEKHA8Q96JA3 519 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 CNN2Q99439 309 aaKnown RBP1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 ZBTB18Q99592 522 aa1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 HDHD3Q9BSH5 251 aaPredicted RBP1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 RIOK2Q9BVS4 552 aaKnown RBP1.8□□□□□ -2.12
R3HDM1-219ENST00000488035 SLC25A39Q9BZJ4 359 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms