RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 ALOX5P09917 674 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 NHLRC4P0CG21 123 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 TAC1P20366 129 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 ATP5F1P24539 256 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 RFX3P48380 749 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 CLK1P49759 484 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 DIO1P49895 249 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 KHKP50053 298 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 PDLIM4P50479 330 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 ATP12AP54707 1039 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 CSNK2A1P68400 391 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 MRPS25P82663 173 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 SRSF4Q08170 494 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 SPOCK1Q08629 439 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 RAB32Q13637 225 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 EFNB3Q15768 340 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 TOMM34Q15785 309 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 STK11Q15831 433 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 GABRA6Q16445 453 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 FAM219BQ5XKK7 198 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 SUMO4Q6EEV6 95 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 C3orf33Q6P1S2 294 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 SLC22A25Q6T423 547 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 UGT2A3Q6UWM9 527 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF782Q6ZMW2 699 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 TMPPEQ6ZT21 453 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF100Q8IYN0 542 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 COX18Q8N8Q8 333 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 WDR31Q8NA23 367 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 SEMA6DQ8NFY4 1073 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 OR5W2Q8NH69 310 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 SGMS2Q8NHU3 365 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 RP9Q8TA86 221 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 DCAKDQ8WVC6 231 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 XAGE5Q8WWM1 108 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 ST8SIA1Q92185 356 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 APH1AQ96BI3 265 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF524Q96C55 264 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 CCDC126Q96EE4 140 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 FAM120BQ96EK7 910 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 SH3YL1Q96HL8 342 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 EGLN2Q96KS0 407 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF317Q96PQ6 595 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF300Q96RE9 604 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 PAFAH2Q99487 392 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 CCT7Q99832 543 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 PIMREGQ9BSJ6 248 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 EBPLQ9BY08 206 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 REEP4Q9H6H4 257 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 FKRPQ9H9S5 495 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 OBP2BQ9NPH6 170 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 SIRT3Q9NTG7 399 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 NINJ2Q9NZG7 142 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 EMC3Q9P0I2 261 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 TMEM216Q9P0N5 145 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 SH3BP4Q9P0V3 963 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 TRAPPC4Q9Y296 219 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 AMDHD2Q9Y303 409 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 DTNAQ9Y4J8 743 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 TIMM22Q9Y584 194 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 FKBP7Q9Y680 259 aa4.42□□□□□ -1.7
R3HDM1-218ENST00000487294 DYSFO75923 2080 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 LINC01548A6NM66 108 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 B9A039 149 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 TRIM49D1C9J1S8 452 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF264O43296 627 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 GMFGO60234 142 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 RAD51DO75771 328 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 H6PDO95479 791 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 PMS2P2O95744 297 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 TGFAP01135 160 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 HMGN2P05204 90 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 GSTA1P08263 222 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 ITGA5P08648 1049 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 KRT16P08779 473 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 APEHP13798 732 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 DDX5P17844 614 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 EGR1P18146 543 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 PTNP21246 168 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 PCMT1P22061 227 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 APOBEC1P41238 236 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 PPOXP50336 477 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 FOXA1P55317 472 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 POU3F1Q03052 451 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 TGFBR3Q03167 851 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 HSPB3Q12988 150 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 SKP2Q13309 424 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 CBFBQ13951 182 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF141Q15928 474 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 UAP1Q16222 522 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 SYT14P1Q58G82 188 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 CDC73Q6P1J9 531 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 Q6ZWC4 215 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 USP43Q70EL4 1123 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 NATD1Q8N6N6 113 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 GATSQ8NAP1 163 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 FAM71CQ8NEG0 241 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 OR52N5Q8NH56 324 aa4.41□□□□□ -1.7
R3HDM1-218ENST00000487294 ACMSDQ8TDX5 336 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms