RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 STK11Q15831 433 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 CYBRD1Q53TN4 286 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 INTS11Q5TA45 600 aaKnown RBP6.3□□□□□ -1.4
UBE4B-209ENST00000487244 TSPO2Q5TGU0 170 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 FAM91A1Q658Y4 838 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 DEF8Q6ZN54 512 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 CREB3L2Q70SY1 520 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 LINGO2Q7L985 606 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 AAED1Q7RTV5 226 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 VTCN1Q7Z7D3 282 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 CARM1Q86X55 608 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 EPHX4Q8IUS5 362 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 Q8N3U1 123 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF433Q8N7K0 673 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-209ENST00000487244 BHLHE22Q8NFJ8 381 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-209ENST00000487244 STEAP2Q8NFT2 490 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 ADAMTS16Q8TE57 1224 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 TMEM45BQ96B21 275 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 SLC47A1Q96FL8 570 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 PLPPR2Q96GM1 343 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 ALKBH3Q96Q83 286 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-209ENST00000487244 TAPBPLQ9BX59 468 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 NSRP1Q9H0G5 558 aaKnown RBP6.3□□□□□ -1.4
UBE4B-209ENST00000487244 C12orf10Q9HB07 376 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 TMEM27Q9HBJ8 222 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 NPAP1Q9NZP6 1156 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 SLC7A7Q9UM01 511 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 SLC9A8Q9Y2E8 581 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 SH3GLB1Q9Y371 365 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 ZANQ9Y493 2812 aa6.3□□□□□ -1.4
UBE4B-209ENST00000487244 ELOVL7A1L3X0 281 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 TRAPPC13A5PLN9 417 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 MS4A18H0YCH9 400 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 TRAF3IP2O43734 574 aaPredicted RBP6.29□□□□□ -1.4
UBE4B-209ENST00000487244 CHP2O43745 196 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 UPK3AO75631 287 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 GOSR1O95249 250 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 CNOT4O95628 575 aaKnown RBP6.29□□□□□ -1.4
UBE4B-209ENST00000487244 RAF1P04049 648 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 NCK1P16333 377 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 CDH2P19022 906 aaPredicted RBP6.29□□□□□ -1.4
UBE4B-209ENST00000487244 CD53P19397 219 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 GGT1P19440 569 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 KDELR2P33947 212 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 ART1P52961 327 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 PSME3P61289 254 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 SPOCK1Q08629 439 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 MS4A18Q3C1V0 323 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 FAM69AQ5T7M9 428 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 TMEM225Q6GV28 225 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 ERICH5Q6P6B1 374 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF613Q6PF04 617 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 HACD2Q6Y1H2 254 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 ARPINQ7Z6K5 226 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 PIGWQ7Z7B1 504 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 C10orf53Q8N6V4 93 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 LRRC17Q8N6Y2 441 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 RNF148Q8N7C7 305 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 RBM15BQ8NDT2 890 aaKnown RBP6.29□□□□□ -1.4
UBE4B-209ENST00000487244 OR52N5Q8NH56 324 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 PFN4Q8NHR9 129 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 TMEM255BQ8WV15 326 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 PROX1Q92786 737 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 NEUROG1Q92886 237 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 SLC41A3Q96GZ6 507 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 TPD52L3Q96J77 140 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 PRSS27Q9BQR3 290 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 TMEM204Q9BSN7 226 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 TMEM43Q9BTV4 400 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF426Q9BUY5 554 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 SF3B5Q9BWJ5 86 aaKnown RBP6.29□□□□□ -1.4
UBE4B-209ENST00000487244 HDHD5Q9BXW7 423 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 PCDHAC1Q9H158 963 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 OR10A4Q9H209 315 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 SLCO5A1Q9H2Y9 848 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 UBTD1Q9HAC8 227 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 EFCAB1Q9HAE3 211 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 FANCFQ9NPI8 374 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 ARL8BQ9NVJ2 186 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 ASB6Q9NWX5 421 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 SELENONQ9NZV5 590 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 ABCD2Q9UBJ2 740 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 PRDM4Q9UKN5 801 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 RASD1Q9Y272 281 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 HIF3AQ9Y2N7 669 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 SNX13Q9Y5W8 968 aa6.29□□□□□ -1.4
UBE4B-209ENST00000487244 CIB4A0PJX0 185 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 DPRXA6NFQ7 191 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 OR5H1A6NKK0 313 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 ENO4A6NNW6 628 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 J3KTA2 159 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 CXCR6O00574 342 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 CLOCKO15516 846 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 OR2T1O43869 369 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 PIP5K1CO60331 668 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 SERPINI2O75830 405 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF432O94892 652 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF682O95780 498 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 CH25HO95992 272 aa6.28□□□□□ -1.4
UBE4B-209ENST00000487244 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms