RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 NCDNQ9UBB6 729 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 ICAM5Q9UMF0 924 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF281Q9Y2X9 895 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 SLC22A7Q9Y694 548 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 MYOFQ9NZM1 2061 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 F5H0A9 414 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 KCNAB3O43448 404 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 GPRIN2O60269 458 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 POP7O75817 140 aaKnown RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ZFPL1O95159 310 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 HTR3BO95264 441 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ITGB2P05107 769 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 GALTP07902 379 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 CD79AP11912 226 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 HTRA4P83105 476 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 REEP5Q00765 189 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 PEA15Q15121 130 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 DEFB115Q30KQ5 88 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 AMZ1Q400G9 498 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 LIPNQ5VXI9 398 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 RPL13AP3Q6NVV1 102 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 TMPRSS11FQ6ZWK6 438 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 TMED4Q7Z7H5 227 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF547Q8IVP9 402 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 CDK20Q8IZL9 346 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 GTPBP8Q8N3Z3 284 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ADAMTS15Q8TE58 950 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 CXorf40AQ8TE69 158 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 CDS1Q92903 461 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 MOAP1Q96BY2 351 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 FBXO17Q96EF6 278 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 TRMT2BQ96GJ1 504 aaKnown RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 CNN2Q99439 309 aaKnown RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 MRI1Q9BV20 369 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 EPHX3Q9H6B9 360 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 MTHFD2LQ9H903 347 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 SFXN1Q9H9B4 322 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 MRPS30Q9NP92 439 aaKnown RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 UQCC1Q9NVA1 299 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 USP36Q9P275 1121 aaKnown RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 SLC25A13Q9UJS0 675 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 FBXO4Q9UKT5 387 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 YIPF1Q9Y548 306 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ETV7Q9Y603 341 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 A0A1B0GTI1 187 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 TTLL8A6PVC2 850 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 C4orf51C9J302 202 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 K7ESM1 405 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 CCSO14618 274 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 FOLR2P14207 255 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF44P15621 663 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 CASRP41180 1078 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ATP1B3P54709 279 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 EEF1A1P68104 462 aaKnown RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ELAVL2Q12926 359 aaKnown RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 SLC9A5Q14940 896 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 EIF2S3LQ2VIR3 472 aaKnown RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 USP50Q70EL3 339 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 LRRTM1Q86UE6 522 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ZSCAN1Q8NBB4 408 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 OR5M8Q8NGP6 311 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 OR4K13Q8NH42 304 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ACTRT3Q9BYD9 372 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 TCF7L1Q9HCS4 588 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 ACKR4Q9NPB9 350 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 MEPEQ9NQ76 525 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 COMMD9Q9P000 198 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 GHRLQ9UBU3 117 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 LSM7Q9UK45 103 aaKnown RBP9.74□□□□□ -0.85
CCDC171-208ENST00000486641 KIAA1549LQ6ZVL6 1849 aa9.74□□□□□ -0.85
CCDC171-208ENST00000486641 TBC1D3EA0A087X179 549 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 OR2AT4A6NND4 320 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 SULT2B1O00204 365 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 IMPA2O14732 288 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 TMEM127O75204 238 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 CKBP12277 381 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 EPCAMP16422 314 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 CSNK2A2P19784 350 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 EFNB2P52799 333 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF234Q14588 700 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 INPP5JQ15735 1006 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 STEAP1BQ6NZ63 245 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 TMCO2Q7Z6W1 182 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 RANBP3LQ86VV4 465 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 JAZF1Q86VZ6 243 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 TMPRSS12Q86WS5 348 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 VN1R2Q8NFZ6 395 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 CCDC107Q8WV48 283 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 PPP1R1CQ8WVI7 109 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 ARL11Q969Q4 196 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 CPNE2Q96FN4 548 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF285Q96NJ3 590 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 GPR174Q9BXC1 333 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 RNF122Q9H9V4 155 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 PRSS16Q9NQE7 514 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 CXXC1Q9P0U4 656 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 STEAP1Q9UHE8 339 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 WDR45Q9Y484 360 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 A0A1W2PPE3 182 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms