RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 Q6ZSR9 355 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 PTAR1Q7Z6K3 402 aaPredicted RBP3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 TFAP2DQ7Z6R9 452 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 ANKRD46Q86W74 232 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 TMEM173Q86WV6 379 aaPredicted RBP3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 SLC35F3Q8IY50 421 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 ZDHHC23Q8IYP9 409 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 SLC38A6Q8IZM9 456 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 ELMOD1Q8N336 334 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 METTL4Q8N3J2 472 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 PGBD5Q8N414 524 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 SVOPLQ8N434 492 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 SLC44A3Q8N4M1 653 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 OR56A4Q8NGH8 313 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 RAET1EQ8TD07 263 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 NEK7Q8TDX7 302 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 RNF133Q8WVZ7 376 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 TMEM239Q8WW34 195 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 TRUB1Q8WWH5 349 aaKnown RBP3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 C22orf15Q8WYQ4 148 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 AKAP1Q92667 903 aaKnown RBP eCLIP3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 FUBP1Q96AE4 644 aaKnown RBP3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 TCEAL4Q96EI5 215 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 AURKBQ96GD4 344 aaPredicted RBP3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 SMIM10Q96HG1 83 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 AKR1E2Q96JD6 320 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 MS4A10Q96PG2 267 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 SEPT5Q99719 369 aaPredicted RBP3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 C17orf62Q9BQA9 187 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 MESP1Q9BRJ9 268 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 TTYH2Q9BSA4 534 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 UGT2B28Q9BY64 529 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 GSDMCQ9BYG8 508 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 C11orf49Q9H6J7 331 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 MAGIXQ9H6Y5 334 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 CXorf21Q9HAI6 301 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 LPAR2Q9HBW0 351 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 GPR35Q9HC97 309 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 MCCC2Q9HCC0 563 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 EQTNQ9NQ60 294 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 ZC4H2Q9NQZ6 224 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 SPHK1Q9NYA1 384 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 STMN3Q9NZ72 180 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 NUDT4Q9NZJ9 180 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 FLRT1Q9NZU1 646 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 PHF11Q9UIL8 331 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 GNPTGQ9UJJ9 305 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF225Q9UK10 706 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 PCTPQ9UKL6 214 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 FOXJ3Q9UPW0 622 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 NEUROG3Q9Y4Z2 214 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 POLR3HQ9Y535 204 aaPredicted RBP3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 CHD5Q8TDI0 1954 aa3.65□□□□□ -1.82
PRPF38B-205ENST00000485810 MYLKQ15746 1914 aa3.65□□□□□ -1.83
PRPF38B-205ENST00000485810 SHROOM3Q8TF72 1996 aa3.65□□□□□ -1.83
PRPF38B-205ENST00000485810 PPIAL4EA0A075B759 164 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 TRBV5-3A0A0A0MS03 114 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 CXorf51AA0A1B0GTR3 108 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 ATP6AP2A0A1C7CYW4 349 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 A0A1W2PPQ1 181 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 TMEM129A0AVI4 362 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 GXYLT2A0PJZ3 443 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 TMEM89A2RUT3 159 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 CASTOR2A6NHX0 329 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 ZNF98A6NK75 572 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 DUXAA6NLW8 204 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 E9PQ18 207 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 MKRN2OSH3BPM6 223 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 M0R036 132 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 EI24O14681 340 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 INPP4BO15327 924 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 NKX2-8O15522 239 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 RS1O15537 224 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 FLRT2O43155 660 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 ADAM12O43184 909 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 MSI1O43347 362 aaKnown RBP3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 SLC28A2O43868 658 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 DPM1O60762 260 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 SLC43A1O75387 559 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 ATP6AP2O75787 350 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 AP2A2O94973 939 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 SCELO95171 688 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 KRT75O95678 551 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 GLUD1P00367 558 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 C1RP00736 705 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 IFNA16P05015 189 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 HEXAP06865 529 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 RD3LP0DJH9 198 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 PPIAL4FP0DN26 164 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 CBSLP0DN79 551 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 LYL1P12980 280 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 NR2C1P13056 603 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 GGT1P19440 569 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 RPS3P23396 243 aaKnown RBP eCLIP3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 CRHBPP24387 322 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 HLA-DMAP28067 261 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 GTF2E2P29084 291 aaKnown RBP3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 PPP2R1BP30154 601 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 PRDX2P32119 198 aa3.64□□□□□ -1.83
PRPF38B-205ENST00000485810 CBSP35520 551 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms