RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 LINC01560Q8TB33 94 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 PIGXQ8TBF5 258 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 RASSF5Q8WWW0 418 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 NINJ1Q92982 152 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 TAAR8Q969N4 342 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 MBD6Q96DN6 1003 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 KTI12Q96EK9 354 aaPredicted RBP5.04□□□□□ -1.6
CUX1-208ENST00000485792 MPP4Q96JB8 637 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 MUS81Q96NY9 551 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 ELAC2Q9BQ52 826 aaKnown RBP5.04□□□□□ -1.6
CUX1-208ENST00000485792 POLR2J2Q9GZM3 115 aaKnown RBP5.04□□□□□ -1.6
CUX1-208ENST00000485792 POLR2J3Q9H1A7 115 aaKnown RBP5.04□□□□□ -1.6
CUX1-208ENST00000485792 SEC61A2Q9H9S3 476 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 EFCAB1Q9HAE3 211 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 MAN2C1Q9NTJ4 1040 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 GID8Q9NWU2 228 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 NPAP1Q9NZP6 1156 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.04□□□□□ -1.6
CUX1-208ENST00000485792 CD300AQ9UGN4 299 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 PROCRQ9UNN8 238 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 ANGPT4Q9Y264 503 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 B3GALT5Q9Y2C3 310 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 SNX13Q9Y5W8 968 aa5.04□□□□□ -1.6
CUX1-208ENST00000485792 CSPG4Q6UVK1 2322 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ELOVL7A1L3X0 281 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 EEF1E1-BLOC1S5C9J1V9 151 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 FFAR1O14842 300 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 EEF1E1O43324 174 aaKnown RBP5.03□□□□□ -1.6
CUX1-208ENST00000485792 CHP2O43745 196 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 OR2T1O43869 369 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 HPRP00739 348 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 PLAUP00749 431 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 SEMG1P04279 462 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 GPIP06744 558 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ASAH2BP0C7U1 165 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 T-ENOLP0DO92 83 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 THRBP10828 461 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 HSD17B1P14061 328 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 POU2F1P14859 743 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 PAX1P15863 534 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ZNF26P17031 533 aaPredicted RBP5.03□□□□□ -1.6
CUX1-208ENST00000485792 FUT1P19526 365 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 IGHV1-2P23083 117 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 DNAJA1P31689 397 aaKnown RBP5.03□□□□□ -1.6
CUX1-208ENST00000485792 IDUAP35475 653 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 CPA2P48052 419 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 CTBP2P56545 445 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 COPZ1P61923 177 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 SPOCK1Q08629 439 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ZP4Q12836 540 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ITGADQ13349 1161 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 CEACAM7Q14002 265 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 KRT72Q14CN4 511 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 SPATS1Q496A3 300 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ALG10BQ5I7T1 473 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 PHYHD1Q5SRE7 291 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 FBXW9Q5XUX1 488 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 CREB3L2Q70SY1 520 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 CBLL1Q75N03 491 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 SSX8Q7RTT4 187 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 GALNT5Q7Z7M9 940 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 P2RY8Q86VZ1 359 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 CDC20BQ86Y33 519 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 LURAP1LQ8IV03 231 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 MICU2Q8IYU8 434 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 FITM2Q8N6M3 262 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ZNF433Q8N7K0 673 aaPredicted RBP5.03□□□□□ -1.6
CUX1-208ENST00000485792 CNEP1R1Q8N9A8 125 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 SCAIQ8N9R8 606 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 SMYD1Q8NB12 490 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ATP6V1C2Q8NEY4 427 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 OR2T12Q8NG77 320 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 OR9K2Q8NGE7 335 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 LILRB1Q8NHL6 650 aaPredicted RBP5.03□□□□□ -1.6
CUX1-208ENST00000485792 ADAMTS16Q8TE57 1224 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 CMTM5Q96DZ9 223 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 SLC47A1Q96FL8 570 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 MOGAT1Q96PD6 335 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 CCT8L2Q96SF2 557 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 SEPHS2Q99611 448 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ECSITQ9BQ95 431 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 FUZQ9BT04 418 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 LINC00470Q9BZP3 86 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 SLC19A3Q9BZV2 496 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 GORASP2Q9H8Y8 452 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 NOX3Q9HBY0 568 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 MEPEQ9NQ76 525 aaPredicted RBP5.03□□□□□ -1.6
CUX1-208ENST00000485792 ARL8BQ9NVJ2 186 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 NDRG3Q9UGV2 375 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 ARL2BPQ9Y2Y0 163 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 MXRA5Q9NR99 2828 aa5.03□□□□□ -1.6
CUX1-208ENST00000485792 NF1P21359 2839 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 TRAV36DV7A0A075B6V5 113 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 TRAPPC13A5PLN9 417 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 HTR3EA5X5Y0 456 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 NPIPB13A6NJU9 1138 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 NPIPB4C9JG80 1138 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 NDUFAB1O14561 156 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 TRAF3IP2O43734 574 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 PIP5K1CO60331 668 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms