RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 FBN1P35555 2871 aaKnown RBP9.95□□□□□ -0.82
SCFD1-206ENST00000484733 IGKV1D-42A0A075B6H8 117 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 NR5A2O00482 541 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 OR4A8P0C604 315 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 HTR2AP28223 471 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 ARR3P36575 388 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 HOXC5Q00444 222 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 CDK6Q00534 326 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 C1DQ13901 141 aaKnown RBP9.95□□□□□ -0.82
SCFD1-206ENST00000484733 AGBL2Q5U5Z8 902 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 ULK3Q6PHR2 472 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 KRT73Q86Y46 540 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 PHC2Q8IXK0 858 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 TMEM123Q8N131 208 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 KDM8Q8N371 416 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 GPR137CQ8N3F9 429 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 PIK3C3Q8NEB9 887 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 SLC47A1Q96FL8 570 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 OR2M2Q96R28 347 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 BEX2Q9BXY8 128 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 TMEM38AQ9H6F2 299 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 TESQ9UGI8 421 aaKnown RBP9.95□□□□□ -0.82
SCFD1-206ENST00000484733 CORINQ9Y5Q5 1042 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 A0A096LPE4 126 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 TRBV5-3A0A0A0MS03 114 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 A0A1W2PPZ6 126 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 PRORSD1PA6NEY8 169 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 MS4A18H0YCH9 400 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 M0R082 166 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 LMX1BO60663 402 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 GRPRP30550 384 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 ATP4BP51164 291 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 IDH3GP51553 393 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-206ENST00000484733 HGFACQ04756 655 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 MS4A18Q3C1V0 323 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 NHLRC1Q6VVB1 395 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 SLC46A3Q7Z3Q1 461 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 SCAIQ8N9R8 606 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF540Q8NDQ6 660 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 NFKBIDQ8NI38 313 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF417Q8TAU3 575 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 NEU4Q8WWR8 484 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-206ENST00000484733 SPDL1Q96EA4 605 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF587Q96SQ5 575 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-206ENST00000484733 DOK1Q99704 481 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 RAB1BQ9H0U4 201 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 TCF7L2Q9NQB0 619 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 CORO2BQ9UQ03 480 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 A0A087WUJ7 227 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 POLR3GO15318 223 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-206ENST00000484733 TRAF3IP2O43734 574 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-206ENST00000484733 ERLIN1O75477 346 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 LY6HO94772 140 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 BGLAPP02818 100 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF16P17020 682 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-206ENST00000484733 GPX2P18283 190 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 IDH3AP50213 366 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 TUBA1BP68363 451 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 TUBA4AP68366 448 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 ALG10BQ5I7T1 473 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 BEND6Q5SZJ8 279 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-206ENST00000484733 FAM166AQ6J272 317 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 TUBA1AQ71U36 451 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF627Q7L945 461 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 COMTD1Q86VU5 262 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 C20orf196Q8IYI0 205 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 EPYCQ99645 322 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 REPIN1Q9BWE0 567 aaKnown RBP9.94□□□□□ -0.82
SCFD1-206ENST00000484733 PRR14Q9BWN1 585 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 SHARPINQ9H0F6 387 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 SEC61A2Q9H9S3 476 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 SEC14L4Q9UDX3 406 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 USP22Q9UPT9 525 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 RTTNQ86VV8 2226 aa9.94□□□□□ -0.82
SCFD1-206ENST00000484733 ALPK2Q86TB3 2170 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF99A8MXY4 864 aaPredicted RBP9.93□□□□□ -0.82
SCFD1-206ENST00000484733 PHF1O43189 567 aaPredicted RBP9.93□□□□□ -0.82
SCFD1-206ENST00000484733 NPR2P20594 1047 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 GIFP27352 417 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 POU3F1Q03052 451 aaPredicted RBP9.93□□□□□ -0.82
SCFD1-206ENST00000484733 CEACAM16Q2WEN9 425 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 STON2Q8WXE9 905 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 ANKRD27Q96NW4 1050 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 FOXN4Q96NZ1 517 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF607Q96SK3 696 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 VRK1Q99986 396 aaPredicted RBP9.93□□□□□ -0.82
SCFD1-206ENST00000484733 TMEM27Q9HBJ8 222 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 B3GNT2Q9NY97 397 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 SLAMF8Q9P0V8 285 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 KCNS2Q9ULS6 477 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 IGHV2OR16-5A0A0B4J2B6 119 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 A0A0B4J2E0 115 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 A0A1B0GX12 115 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 TMEM129A0AVI4 362 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 TPST1O60507 370 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 STAMBPO95630 424 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 APEHP13798 732 aaKnown RBP9.93□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF23P17027 643 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 THBS4P35443 961 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 OR1Q1Q15612 314 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms