RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, human

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP40-206	ENST00000483546	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.79	□□□□□ -0.2
RPP40-206	ENST00000483546	IL1RAP	Q9NPH3	570 aa		13.79	□□□□□ -0.2
RPP40-206	ENST00000483546	TAS2R16	Q9NYV7	291 aa		13.79	□□□□□ -0.2
RPP40-206	ENST00000483546	SEC14L4	Q9UDX3	406 aa		13.79	□□□□□ -0.2
RPP40-206	ENST00000483546		A6NNC1	897 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546		J3KTA2	159 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	TRAF3IP2	O43734	574 aa	Predicted RBP	13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	ZNF432	O94892	652 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	FABP3	P05413	133 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	ADORA3	P0DMS8	318 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	FUT1	P19526	365 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	PTN	P21246	168 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	CBL	P22681	906 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	CRYGS	P22914	178 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	CLDN17	P56750	224 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	VLDLR	P98155	873 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	IL1RL1	Q01638	556 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	PRKCD	Q05655	676 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	SNTB1	Q13884	538 aa	Known RBP	13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	OR7E24	Q6IFN5	339 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	ZNF730	Q6ZMV8	503 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	TSEN54	Q7Z6J9	526 aa	Known RBP	13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	CDK20	Q8IZL9	346 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	KDM8	Q8N371	416 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	HSD17B8	Q92506	261 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	DHRS1	Q96LJ7	313 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	LRGUK	Q96M69	825 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	ADAD1	Q96M93	576 aa	Known RBP	13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	WFIKKN1	Q96NZ8	548 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	TMEM5	Q9Y2B1	443 aa		13.78	□□□□□ -0.2
RPP40-206	ENST00000483546	LRRN3	E7EW58	273 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	hCG_2039718	K7EN88	272 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	PDLIM1	O00151	329 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	SLC43A1	O75387	559 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	CTAG2	O75638	210 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	DNAJC8	O75937	253 aa	Predicted RBP	13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	KRT33A	O76009	404 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	PDE5A	O76074	875 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	HPR	P00739	348 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	TSPAN19	P0C672	248 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	IFI30	P13284	250 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	PRF1	P14222	555 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	ATP6V1B2	P21281	511 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	IGHV1-2	P23083	117 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	AHCY	P23526	432 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	EDNRA	P25101	427 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	MPG	P29372	298 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	SLC9A3	P48764	834 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	POU3F1	Q03052	451 aa	Predicted RBP	13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	FAP	Q12884	760 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	IQCC	Q4KMZ1	466 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	TSPO2	Q5TGU0	170 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	NIPAL3	Q6P499	406 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	PGM2L1	Q6PCE3	622 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	CYP2R1	Q6VVX0	501 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	MBOAT2	Q6ZWT7	520 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	HDDC2	Q7Z4H3	204 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	LSR	Q86X29	649 aa	Predicted RBP	13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	C17orf78	Q8N4C9	275 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	PFN4	Q8NHR9	129 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	BPIFA2	Q96DR5	249 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	BOD1	Q96IK1	185 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	LRR1	Q96L50	414 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	NGB	Q9NPG2	151 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	SLC7A10	Q9NS82	523 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	C20orf141	Q9NUB4	165 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546	RHCG	Q9UBD6	479 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546		V9GYQ6	96 aa		13.77	□□□□□ -0.21
RPP40-206	ENST00000483546		A0A087WUU8	490 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	TCRBV5S2	A0A599	114 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	NPIPB13	A6NJU9	1138 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	AQP12B	A6NM10	295 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	NPIPB4	C9JG80	1138 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	ZNF587B	E7ETH6	402 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	IGHV3-9	P01782	118 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	PAX7	P23759	505 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	MAGEA2	P43356	314 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	SELENOP	P49908	381 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	SH3BGR	P55822	239 aa	Predicted RBP	13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	TIMM23B	Q5SRD1	257 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	NHLRC1	Q6VVB1	395 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	TMPRSS11F	Q6ZWK6	438 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	ZDHHC21	Q8IVQ6	265 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	AQP12A	Q8IXF9	295 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	NRM	Q8IXM6	262 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	LRRC17	Q8N6Y2	441 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	SLC7A13	Q8TCU3	470 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	S100PBP	Q96BU1	408 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	CCDC124	Q96CT7	223 aa	Known RBP	13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	RASSF1	Q9NS23	344 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	TAS2R5	Q9NYW4	299 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	STX18	Q9P2W9	335 aa	Known RBP	13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	HIF3A	Q9Y2N7	669 aa		13.76	□□□□□ -0.21
RPP40-206	ENST00000483546	CIB4	A0PJX0	185 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms