RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 HAS3O00219 553 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 OR7A10O76100 309 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 KLF8O95600 359 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-210ENST00000482158 PSG2P11465 335 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 TDGF1P13385 188 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 ATP1B2P14415 290 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-210ENST00000482158 CMA1P23946 247 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 TDGF1P3P51864 188 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 IRX3P78415 501 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-210ENST00000482158 ACVR1Q04771 509 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 PPIL2Q13356 520 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 KIAA0087Q14695 138 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 ZMYND11Q15326 602 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 MPPED2Q15777 294 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 ZNF658BQ4V348 819 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-210ENST00000482158 C6orf89Q6UWU4 347 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 H2BFWTQ7Z2G1 175 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 SDR9C7Q8NEX9 313 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 RNF185Q96GF1 192 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 TCEANC2Q96MN5 208 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 MS4A4EQ96PG1 132 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 CNN2Q99439 309 aaKnown RBP3.68□□□□□ -1.82
SF3B1-210ENST00000482158 SLC39A3Q9BRY0 314 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 CHRDL1Q9BU40 450 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 GCOM2Q9BZD3 368 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-210ENST00000482158 ROGDIQ9GZN7 287 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 SIAEQ9HAT2 523 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 IL26Q9NPH9 171 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 COX16Q9P0S2 106 aa3.68□□□□□ -1.82
SF3B1-210ENST00000482158 TOM1O60784 492 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 C1orf105O95561 183 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 GIPP09681 153 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-210ENST00000482158 CRISP2P16562 243 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 SH3BGRP55822 239 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-210ENST00000482158 BST1Q10588 318 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 CAPRIN1Q14444 709 aaKnown RBP3.67□□□□□ -1.82
SF3B1-210ENST00000482158 GNMTQ14749 295 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 CYTH1Q15438 398 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 OR1L6Q8NGR2 347 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 OR13C2Q8NGS9 318 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 BLOC1S5Q8TDH9 187 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 PYROXD1Q8WU10 500 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 SHC3Q92529 594 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 IL22RA2Q969J5 263 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 LRRC58Q96CX6 371 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 ZNF285Q96NJ3 590 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 CALYQ9NYX4 217 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 SLC25A15Q9Y619 301 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 NPTNQ9Y639 398 aa3.67□□□□□ -1.82
SF3B1-210ENST00000482158 ARHGEF35A5YM69 484 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 MMP1P03956 469 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 ABOP16442 354 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 VHLP40337 213 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 CRISP3P54108 245 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 CDH4P55283 916 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 RPL23AP62750 156 aaKnown RBP3.66□□□□□ -1.82
SF3B1-210ENST00000482158 REG3AQ06141 175 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 CTSL3PQ5NE16 218 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 Q6ZVH6 145 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 THOC6Q86W42 341 aaKnown RBP3.66□□□□□ -1.82
SF3B1-210ENST00000482158 FNDC5Q8NAU1 212 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 ACER1Q8TDN7 264 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 SRSF12Q8WXF0 261 aaKnown RBP3.66□□□□□ -1.82
SF3B1-210ENST00000482158 SMARCD2Q92925 531 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 FAM104AQ969W3 186 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 PELOQ9BRX2 385 aaKnown RBP3.66□□□□□ -1.82
SF3B1-210ENST00000482158 GBA3Q9H227 469 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 TRAPPC4Q9Y296 219 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 FANCIQ9NVI1 1328 aa3.66□□□□□ -1.82
SF3B1-210ENST00000482158 FAM240BA0A1B0GVZ2 78 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 FAM166BA8MTA8 275 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 C12orf71A8MTZ7 269 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 GOLGA8SH3BPF8 625 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 SERPINA3P01011 423 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 UBTFL1P0CB47 393 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-210ENST00000482158 MX1P20591 662 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 FDFT1P37268 417 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 NPBWR2P48146 333 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 MECOMQ03112 1051 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 MRPL28Q13084 256 aaKnown RBP3.65□□□□□ -1.83
SF3B1-210ENST00000482158 DDX39BQ13838 428 aaKnown RBP3.65□□□□□ -1.83
SF3B1-210ENST00000482158 CYB5R2Q6BCY4 276 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 ZNF621Q6ZSS3 439 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 PLA2G4DQ86XP0 818 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 PLEKHA8Q96JA3 519 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 LINC00167Q96N53 147 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 RANBP3Q9H6Z4 567 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-210ENST00000482158 XCL2Q9UBD3 114 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 SUN2Q9UH99 717 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 SLC7A8Q9UHI5 535 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 PEX16Q9Y5Y5 336 aa3.65□□□□□ -1.83
SF3B1-210ENST00000482158 KANK1Q14678 1352 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 ZNFX1Q9P2E3 1918 aaKnown RBP3.64□□□□□ -1.83
SF3B1-210ENST00000482158 SYNJ2BP-COX16A0A087WUM0 186 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 A6NDX4 124 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 IGHV2-5P01817 119 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 FGF1P05230 155 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 CT62P0C5K7 136 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 CCNCP24863 283 aa3.64□□□□□ -1.83
SF3B1-210ENST00000482158 EPS15P42566 896 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms