RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 TSEN54Q7Z6J9 526 aaKnown RBP10□□□□□ -0.81
RAPGEF1-207ENST00000481260 RANBP3LQ86VV4 465 aaPredicted RBP10□□□□□ -0.81
RAPGEF1-207ENST00000481260 C10orf53Q8N6V4 93 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 RNF148Q8N7C7 305 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 PCYOX1LQ8NBM8 494 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 FAM156AQ8NDB6 213 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 OR2T12Q8NG77 320 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 TMEM255BQ8WV15 326 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 SLC41A3Q96GZ6 507 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 TPD52L3Q96J77 140 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 MUS81Q96NY9 551 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 SLCO5A1Q9H2Y9 848 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 SEC61A2Q9H9S3 476 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 MEPEQ9NQ76 525 aaPredicted RBP10□□□□□ -0.81
RAPGEF1-207ENST00000481260 ARL8BQ9NVJ2 186 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 GID8Q9NWU2 228 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 MED29Q9NX70 200 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 TAS2R16Q9NYV7 291 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 UPB1Q9UBR1 384 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 RASD1Q9Y272 281 aa10□□□□□ -0.81
RAPGEF1-207ENST00000481260 NIPBLQ6KC79 2804 aaeCLIP10□□□□□ -0.81
RAPGEF1-207ENST00000481260 SHISA9B4DS77 424 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 PLPP3O14495 311 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 HS3ST1O14792 307 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 CHP2O43745 196 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 FMO6PO60774 539 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 CCDC22O60826 627 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 SERPINI2O75830 405 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 GOSR1O95249 250 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 CH25HO95992 272 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 NPPAP01160 153 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 KDELR2P33947 212 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 PSME3P61289 254 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 IL1RL1Q01638 556 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 VEZF1Q14119 521 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 TIMM23BQ5SRD1 257 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 INTS11Q5TA45 600 aaKnown RBP9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 ZNF613Q6PF04 617 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 H1FNTQ75WM6 255 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 SLC46A3Q7Z3Q1 461 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 MYPOPQ86VE0 399 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 SLC30A8Q8IWU4 369 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 TMEM123Q8N131 208 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 FAM86B1Q8N7N1 296 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 BHLHE22Q8NFJ8 381 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 SLC26A7Q8TE54 656 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 HTRA1Q92743 480 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 PERPQ96FX8 193 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 OXGR1Q96P68 337 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 OR2M2Q96R28 347 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 CCL19Q99731 98 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 SH3GL1Q99961 368 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 TMEM43Q9BTV4 400 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 ZNF426Q9BUY5 554 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 AMBRA1Q9C0C7 1298 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 PCDHAC1Q9H158 963 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 LRMDAQ9H2I8 198 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 SLC17A5Q9NRA2 495 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 C20orf141Q9NUB4 165 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 RHCGQ9UBD6 479 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 RNF115Q9Y4L5 304 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 MED13LQ71F56 2210 aa9.99□□□□□ -0.81
RAPGEF1-207ENST00000481260 ELOVL7A1L3X0 281 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 TRAPPC13A5PLN9 417 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 A6NHS1 94 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 C11orf98E9PRG8 122 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 M0R1B8 84 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 CXCR6O00574 342 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 ABCD4O14678 606 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 FFAR1O14842 300 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 AHCYL1O43865 530 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 CNOT4O95628 575 aaKnown RBP9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 CD3EP07766 207 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 PAX7P23759 505 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 GTF2E2P29084 291 aaKnown RBP9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 MPGP29372 298 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 HOXC12P31275 282 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 MSX2P35548 267 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 ROR2Q01974 943 aaKnown RBP9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 POU3F1Q03052 451 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 PMS2P3Q13401 168 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 ZNF74Q16587 644 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 PGGHGQ32M88 737 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 ERICH5Q6P6B1 374 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 CIARTQ8N365 385 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 OR1K1Q8NGR3 316 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 PROX1Q92786 737 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 BCL2L2Q92843 193 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 ZNF570Q96NI8 536 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 ALPK1Q96QP1 1244 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 SMR3AQ99954 134 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 SH3GL3Q99963 347 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 GSX1Q9H4S2 264 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 FANCFQ9NPI8 374 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 MAN2C1Q9NTJ4 1040 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 PARPBPQ9NWS1 579 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 MRPL39Q9NYK5 338 aaKnown RBP9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 TAS2R5Q9NYW4 299 aa9.98□□□□□ -0.81
RAPGEF1-207ENST00000481260 SELENONQ9NZV5 590 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms