RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 HMGA2P52926 109 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 CLDN12P56749 244 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 PCBP4P57723 403 aaKnown RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 CNN3Q15417 329 aaKnown RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 TMEM241Q24JQ0 296 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 ZNF750Q32MQ0 723 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 PRAMEF20Q5VT98 475 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 BTNL3Q6UXE8 466 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 TMCO2Q7Z6W1 182 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 ADIPOR2Q86V24 386 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 NR2C2APQ86WQ0 139 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 SP8Q8IXZ3 490 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 FBXO39Q8N4B4 442 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 OR4K5Q8NGD3 323 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 OR5L2Q8NGL0 311 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 TMEM19Q96HH6 336 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 COA1Q9GZY4 146 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 ZDHHC3Q9NYG2 299 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 NCDNQ9UBB6 729 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 ZNF70Q9UC06 446 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 PITPNC1Q9UKF7 332 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 RAI2Q9Y5P3 530 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 MYO18AQ92614 2054 aaKnown RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 ANKRD20A5PA0PJZ0 165 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 C2orf78A6NCI8 922 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 MOXD2PA6NHM9 499 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 F5H0A9 414 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 ZNF432O94892 652 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 RPN2P04844 631 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 CD1DP15813 335 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 CD1CP29017 333 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 CCND3P30281 292 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 TLX1P31314 330 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 RABIFP47224 123 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 SLC11A1P49279 550 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 CCR8P51685 355 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 HSF1Q00613 529 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 RAB40BQ12829 278 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 MTAPQ13126 283 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 C2orf68Q2NKX9 166 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 HECTD2Q5U5R9 776 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 OR2M7Q8NG81 312 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 OR5AP2Q8NGF4 316 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 THAP3Q8WTV1 239 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 DCAF4Q8WV16 495 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 NT5C3BQ969T7 300 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 STACQ99469 402 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 FSD1LQ9BXM9 530 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 RGCCQ9H4X1 137 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 CUTCQ9NTM9 273 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 ASIC5Q9NY37 505 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 DNAJC27Q9NZQ0 273 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 RCE1Q9Y256 329 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 WIF1Q9Y5W5 379 aa9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 COL2A1P02458 1487 aaPredicted RBP9.53□□□□□ -0.88
PRPF4B-206ENST00000481109 A0A1B0GTL3 188 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 G3V3G9 751 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 SPINT1O43278 529 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 CTAG2O75638 210 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 UCHL1P09936 223 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 GIMD1P0DJR0 217 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 CASRP41180 1078 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 BCL2L1Q07817 233 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 ARHGAP1Q07960 439 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 SPOCK1Q08629 439 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 IQCJQ1A5X6 159 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 MFSD14CQ5VZR4 134 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 C11orf87Q6NUJ2 197 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 SFXN4Q6P4A7 337 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 TMPRSS7Q7RTY8 843 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 TAF8Q7Z7C8 310 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 LINC01551Q86U37 167 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 PIK3IP1Q96FE7 263 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 IL4I1Q96RQ9 567 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 ATOH8Q96SQ7 321 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 MRPL17Q9NRX2 175 aaKnown RBP9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 RASD1Q9Y272 281 aa9.52□□□□□ -0.88
PRPF4B-206ENST00000481109 A0A0G2JN53 185 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 SMAD9O15198 467 aaKnown RBP9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 ZNF264O43296 627 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 MFSD11O43934 449 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 SRPX2O60687 465 aaPredicted RBP9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 ONECUT2O95948 504 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 TOMM40O96008 361 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 FGBP02675 491 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 EPHX1P07099 455 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 SELEP16581 610 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 HMGB2P26583 209 aaKnown RBP9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 EPHA8P29322 1005 aaPredicted RBP9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 DGKEP52429 567 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 EFNA3P52797 238 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 UBE2V1Q13404 147 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 HEPACAMQ14CZ8 416 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 CDO1Q16878 200 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 LINC00303Q3SY05 128 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 XKR6Q5GH73 641 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 MRM1Q6IN84 353 aaKnown RBP9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 GRHL2Q6ISB3 625 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 CEACAM20Q6UY09 585 aa9.52□□□□□ -0.89
PRPF4B-206ENST00000481109 TSEN54Q7Z6J9 526 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms